Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq70 107 2e-18 seq168 96.9 3e-15 >seq70 Length=128403 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 94818 CCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGA 94877 ||||||| | ||| |||||||| | ||| | ||| || || || |||||| |||||| Sbjct 69733 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAGA 69674 Query 94878 TTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGC 94937 | |||| ||||| ||||||||||| ||||| ||||| | ||| || | |||||| | Sbjct 69673 TCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGT 69614 Query 94938 CGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAA 94997 ||| ||||| | || || |||| |||||||| || || || || || || || | Sbjct 69613 CGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 69554 Query 94998 AGATCTGCATGCTT 95011 || | || || ||| Sbjct 69553 AGCTGTGAATTCTT 69540 >seq168 Length=68123 Score = 96.9 bits (106), Expect = 3e-15 Identities = 136/186 (73%), Gaps = 5/186 (3%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| ||||| |||||||||||||| | ||| |||||||| | || | || || | Sbjct 27998 CAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTACGGCCGTCTTCAA 28057 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 | || || || ||||||| | | ||||||||| |||||||| ||||| || || | | Sbjct 28058 GTTGCTTGCCAGCAAAGATAAGGCGTTGCTGATCCGGAGGAATGCCTTCCTTATCCTGGA 28117 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTTT 94977 | || | ||||||| | | | |||||| || ||| || || |||| |||||||| || Sbjct 28118 TCTTGGACTTGACGTTGTCAATAGTGTC-GC-TGGACTCCACCTCAAGGGTGATGGTCTT 28175 Query 94978 TCCAGT 94983 ||| || Sbjct 28176 TCCGGT 28181 Score = 86.0 bits (94), Expect = 6e-12 Identities = 149/211 (71%), Gaps = 7/211 (3%) Strand=Plus/Plus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA--ATCCTC 94857 |||| || | ||| ||||| || || | ||| || || | |||| ||| || ||| || Sbjct 27770 CAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTC--TGATAGAGTTCGACCATCTTC 27827 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 || |||||| ||| | ||||| |||| || || || ||||||||||| ||||| || | Sbjct 27828 CAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGAATACCCTCTTTATCTTG 27887 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTT 94976 || || | ||| || | | | || || || | || || || | |||||||| | Sbjct 27888 GATCTTGGACTTAACATTGTCAATGGTATC-GCTAGACTCCACCTCGAGGGTGATGGTCT 27946 Query 94977 TTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 |||| || ||||| || || ||||| ||||| Sbjct 27947 TTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448288358954520