Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq168 89.7 4e-13 >seq168 Length=68123 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||||||| || || || | ||| || || |||||||| || ||||||||||||| Sbjct 27523 CCACCTCGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGAG 27582 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | || ||||| |||||||| || | || | ||||||||||| || Sbjct 27583 AGAGTTCGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGA 27642 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | |||||||| || || | ||| || | | | | |||||| | ||| | Sbjct 27643 ATACCCTCTTTATCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGATGACTCGACT 27702 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| || || || || || || |||||||| || ||||| Sbjct 27703 TCCAAAGTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || |||| |||| |||||| ||| ||||||||| ||||||||||||| Sbjct 27295 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 27354 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| | ||||||||||| ||||| ||| | || | ||||| || || || Sbjct 27355 AGAGTTCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGATCGGGTGGG 27414 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | ||||| ||||| || |||| ||| || | | | | |||||| | || Sbjct 27415 ATTCCCTCCTTGTCTTGGATCTTTG--ACTTGACATTGTCGATCGTGTCGGATGATTCGA 27472 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||| | || || || || || || || |||||||| ||||||||||| Sbjct 27473 CTTCTAGAGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405085496935930