Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq168 141 8e-29 seq70 105 6e-18 >seq168 Length=68123 Score = 141 bits (156), Expect = 8e-29 Identities = 170/229 (74%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| | || || || | ||||| | ||||| ||||| || Sbjct 27749 ATGCAAATCTTTGTCAAGACCCTCACAGGCAAGACAATCACTTTGGAAGTCGAGTCATCC 27690 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || ||| || ||| || ||||| || ||||||||||||| Sbjct 27689 GACACCATCGA--CAATGTCAAGTCCAAGATCCAAGATAAAGAGGGTATTCCACCTGACC 27632 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || ||||||||||| || ||||||| ||| ||| | ||| |||| Sbjct 27631 AACAGCGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGTCGAACTCTCTCCGACTACA 27572 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | ||||| || || || || || ||| | ||||| || ||| |||| || Sbjct 27571 ACATTCAGAAGGAGTCAACTCTTCATCTCGTGCTTAGACTACGAGGTGG 27523 Score = 120 bits (132), Expect = 3e-22 Identities = 156/214 (73%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || |||||| | ||||| || ||||||| |||| |||||||| Sbjct 27977 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAGTCTAGC 27918 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 || || || || || || ||| || ||| || ||||| || ||||| ||||||| Sbjct 27917 GATACCATTGA--CAATGTTAAGTCCAAGATCCAAGATAAAGAGGGTATTCCTCCTGACC 27860 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 ||||||| | || || ||||| ||||| || ||||||| ||| ||| | || |||| Sbjct 27859 AACAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGAACTCTATCAGACTACA 27800 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 | || || ||||||||||| || ||| | || || Sbjct 27799 ACATCCAGAAAGAATCCACTCTTCATCTTGTCCT 27766 >seq70 Length=128403 Score = 105 bits (116), Expect = 6e-18 Identities = 143/195 (73%), Gaps = 6/195 (3%) Strand=Plus/Plus Query 24995 AACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTC 25054 || ||| || | || || ||||| | || || || ||||||| | || |||||||| Sbjct 69540 AAGAATTCACAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTC 69599 Query 25055 GTCTGACACTATCGAGTCACTG--AAG-CAAAAAATCACTGACAAAGAAGGGATTCCACC 25111 ||| ||||| ||||| || || ||| | || | ||| ||||| ||||| ||||| || Sbjct 69600 GTCCGACACCATCGA--CAATGTCAAGTCCAAGATTCA-AGACAAGGAAGGAATTCCTCC 69656 Query 25112 TGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGA 25171 ||||| ||||| | || |||||||| || ||| | ||||||| ||||| | |||| Sbjct 69657 AGACCAGCAGCGATTGATCTTTGCCGGAAAGCAACTTGAAGATGGCCGCACCCTCAGCGA 69716 Query 25172 TTACAATATTCAAAA 25186 |||||| || ||||| Sbjct 69717 TTACAACATCCAAAA 69731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433325322439205