Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq168 145 6e-30 seq70 98.7 8e-16 >seq168 Length=68123 Score = 145 bits (160), Expect = 6e-30 Identities = 169/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| ||||| || ||||| |||| || || || | ||||| ||||| ||| | || Sbjct 27521 ATGCAGATTTTCGTCAAAACCCTAACTGGCAAGACTATTACTCTAGAAGTCGAATCATCC 27462 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| || |||| ||| || |||||||||||||| || ||||||||||| Sbjct 27461 GACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGAATCCCACCCGATCAG 27402 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| ||||| || || |||||| || || ||||||| |||||| Sbjct 27401 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAGGATGGTCGAACTCTCTCCGACTACAAC 27342 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || ||||| || |||| | ||||| || ||| || |||| || ||| Sbjct 27341 ATCCAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACTGCGTGGTGGT 27294 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| ||||| || || | || || || || ||||| | ||||| || | || Sbjct 27749 ATGCAAATCTTTGTCAAGACCCTCACAGGCAAGACAATCACTTTGGAAGTCGAGTCATCC 27690 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || || ||||| || |||||||||||||| || ||| Sbjct 27689 GACACCATCGACAATGTCAAGTCCAAGATCCAAGATAAAGAGGGTATTCCACCTGACCAA 27630 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || |||||||||||||| || ||| || || ||||||| |||||| Sbjct 27629 CAGCGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGTCGAACTCTCTCCGACTACAAC 27570 Query 22399 ATTCAAAAAGAATCCAC 22415 ||||| || || || || Sbjct 27569 ATTCAGAAGGAGTCAAC 27553 Score = 118 bits (130), Expect = 9e-22 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||| | ||||| || || |||| || || ||||| | | | Sbjct 27977 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAGTCTAGC 27918 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | ||| || | || || || ||||| || ||||||||||| || || ||| Sbjct 27917 GATACCATTGACAATGTTAAGTCCAAGATCCAAGATAAAGAGGGTATTCCTCCTGACCAA 27858 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || ||||| |||||||| || ||| || || | || || |||||| Sbjct 27857 CAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGAACTCTATCAGACTACAAC 27798 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 || || ||||||||||| | ||| | || |||| | || || ||| Sbjct 27797 ATCCAGAAAGAATCCACTCTTCATCTTGTCCTGCGCCTCCGTGGTGGT 27750 Score = 100 bits (110), Expect = 2e-16 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| ||||| ||| ||| || | ||| | |||| Sbjct 28181 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCCAGCGACACTATTGACAACGTCAAGTCC 28122 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || ||||| || ||||| || ||||| ||||| ||||| ||||| ||||| Sbjct 28121 AAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAACGCCTTATCTTTGCTGGCAAG 28062 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | || || ||| ||| | |||||||||||| ||||| ||||| ||| | ||| Sbjct 28061 CAACTTGAAGACGGCCGTACCCTAAGCGATTACAACATCCAAAAGGAATCTACCTTGCAT 28002 >seq70 Length=128403 Score = 98.7 bits (108), Expect = 8e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| ||||| | |||| ||| | ||| || |||| Sbjct 69568 ACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACCATCGACAATGTCAAGTCC 69627 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || |||||||||||||| || ||||| || || || || || | || |||||||| || Sbjct 69628 AAGATTCAAGACAAGGAAGGAATTCCTCCAGACCAGCAGCGATTGATCTTTGCCGGAAAG 69687 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 || | || ||| ||||||| || |||||||||||| ||||| Sbjct 69688 CAACTTGAAGATGGCCGCACCCTCAGCGATTACAACATCCAAAA 69731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419725406474455