Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq168 114 1e-20 seq70 93.3 4e-14 >seq168 Length=68123 Score = 114 bits (126), Expect = 1e-20 Identities = 150/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | |||||||| ||||| |||||||||||| Sbjct 27976 ATACCACCACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCG 28035 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 || | ||||| ||||||||||| || ||||| |||| || || || || |||||| Sbjct 28036 CTTAGGGTACGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATAAGGCGTTGCTGATCCGGA 28095 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| || || ||||| || | | |||| |||||| |||| || Sbjct 28096 GGAATGCCTTCCTTATCCTGGATCTTGGACTTGACGTTGTCAATAGTGTCGCTGGACTCC 28155 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCA 114360 || || | ||| | || || ||||||| Sbjct 28156 ACCTCAAGGGTGATGGTCTTTCCGGTCA 28183 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| || |||||||| | || | ||| | || || || || ||||||||||| ||| Sbjct 27520 ATACCACCTCGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCG 27579 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| |||||| | ||||| || ||| |||| | ||||||||||| || Sbjct 27580 GAGAGAGTTCGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGT 27639 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || ||||| || ||||| || | | || | |||||||| || ||| Sbjct 27640 GGAATACCCTCTTTATCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGATGACTCG 27699 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || ||||| || || || || ||||| || ||||| Sbjct 27700 ACTTCCAAAGTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | || || | ||| | || |||||||| || |||||||| || Sbjct 27748 ATACCACCACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCT 27807 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| |||||| | |||||||| ||| |||| | ||||||||||| ||| Sbjct 27808 GATAGAGTTCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGA 27867 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || ||||| || ||||| || | | |||| ||| ||| | || || Sbjct 27868 GGAATACCCTCTTTATCTTGGATCTTGGACTTAACATTGTCAATGGTATCGCTAGACTCC 27927 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || || ||||| ||||| || || || || ||||| Sbjct 27928 ACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| |||||||| || ||||| | || || ||||| |||||||| ||| Sbjct 27294 ACCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 27353 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | ||| ||| ||| || | ||| || || || |||| | ||||| || || || || Sbjct 27354 GAGAGTTCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGATCGGGTGG 27413 Query 114275 AATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGAC 114334 || || || ||||| |||||| || | | || | ||||||| |||||||| Sbjct 27414 GATTCCCTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGATGATTCGAC 27473 Query 114335 GTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || | || | || ||||| || || ||||| || ||||||||||| Sbjct 27474 TTCTAGAGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 >seq70 Length=128403 Score = 93.3 bits (102), Expect = 4e-14 Identities = 128/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 114195 TTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATG 114254 ||||| |||||||||||||| | || || |||||||||||| || || || |||| Sbjct 69731 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAGATC 69672 Query 114255 AGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCA 114314 | ||||| ||||| |||||||| ||||| ||||| |||||| || | | || Sbjct 69671 AATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 69612 Query 114315 ACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 114373 | |||||||| || || || || | ||| | || ||||| || || || || || || Sbjct 69611 ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 69553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131803963284