Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq168 158 3e-33 seq70 98.7 2e-15 seq4 89.7 1e-12 >seq168 Length=68123 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || ||||||| ||| |||||| ||||| || ||||| | Sbjct 27751 CCACCACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 27810 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| || ||||| || |||||||||| |||||||| | || Sbjct 27811 AGAGTTCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGA 27870 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || |||||||| ||||| || | || || || || || | |||||| || || || Sbjct 27871 ATACCCTCTTTATCTTGGATCTTGGACTTAACATTGTCAATGGTATCGCTAGACTCCACC 27930 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| |||||||||||||| || ||||| Sbjct 27931 TCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977 Score = 113 bits (124), Expect = 1e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || ||||| | || ||| |||||||| || || ||| Sbjct 27979 CCACCACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTT 28038 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || |||||||| | ||| || || || ||||| || || || ||| || Sbjct 28039 AGGGTACGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATAAGGCGTTGCTGATCCGGAGGA 28098 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||||||||| || | || ||||| || |||| ||||| || || || Sbjct 28099 ATGCCTTCCTTATCCTGGATCTTGGACTTGACGTTGTCAATAGTGTCGCTGGACTCCACC 28158 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCA 288451 || || ||||| ||||| ||||||| Sbjct 28159 TCAAGGGTGATGGTCTTTCCGGTCA 28183 >seq70 Length=128403 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 288274 ATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTT 288333 |||| || | | |||||||| || || ||| ||| ||||| || ||||| | ||| ||| Sbjct 69743 ATCGAGCGTACCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCAAGTTGCTTT 69684 Query 288334 CCTGCGAAGATCAGACGCTGTTGAGAATCTGGG---ATTCCTTCTTTATCCTGGATTTTC 288390 || || ||||||| ||||| || ||||| |||||||| || || || || || Sbjct 69683 CCGGCAAAGATCAATCGCTGCTGG---TCTGGAGGAATTCCTTCCTTGTCTTGAATCTTG 69627 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 | || || || || || | ||| ||| || || || || ||||| ||||| || || Sbjct 69626 GACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTG 69567 Query 288451 AGAGTCTTGACGAA 288464 || ||||||||||| Sbjct 69566 AGGGTCTTGACGAA 69553 >seq4 Length=360590 Score = 89.7 bits (98), Expect = 1e-12 Identities = 305/464 (66%), Gaps = 15/464 (3%) Strand=Plus/Minus Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023 ||||| || || ||||| | ||||||| || || | || ||| ||||||| | | Sbjct 23005 ACGATTGGGGTAATGAATTCGACCAAGAACTTGGGGATCTTCAGGAGACTAGGGAA-CTG 22947 Query 326024 CTA--TGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 326081 || || |||||||| || | | ||| || ||| |||| || |||| ||| | Sbjct 22946 -TACTTGCAAAAAGTTGATCAACAAACCTTTGATATGACTTCCATCGTGATCCTGGTCAG 22888 Query 326082 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTT 326141 |||||||||||| ||||||||||||||| ||||| |||| || || | || Sbjct 22887 TCATGATCATCAAATGACCGTAACGAAGGCCTTGTGTGTCGGTGTAGACCTTCTTGTGTT 22828 Query 326142 GAAGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCA 326198 | || || | ||| || || | ||| || ||| | ||||| | ||| ||| | | Sbjct 22827 GGAGACCAAGGAAATTCTTGATGTTCTG-AATCTCTGCATTCTTGGAGAT--TTGATCGA 22771 Query 326199 CGGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 326258 | || || || || || || | | ||||||||||| ||||| || ||| | || Sbjct 22770 CAGAGGCGTCACGAACATTGAGCAACTTTCCACGAAGCGGGAAAACCCCAAACAAATCCG 22711 Query 326259 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGA 326317 |||| || ||||| | ||||| || ||||| | | | || ||||| || || || || Sbjct 22710 GACCAACAACGGAACGACCTGCCATGGCAAG-GCCTTTGGCTGAATCACCTTCAGTAAGG 22652 Query 326318 ATGAGAGTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGGGA 326377 || || || ||| | | || | ||||| ||| | || ||| | ||||||||| Sbjct 22651 ATTAGGGTACACTTGTGGCCTTCTCGGGTTCCGGCCTTGTTGGCGTCGGTCAGTTTGGGA 22592 Query 326378 ATTCCAGTCACTCGGATCTTCTTGGTACCGTCGGTCTTCTTCAG 326421 | | ||| ||| | ||| |||| || | ||| ||||| Sbjct 22591 TT---ATTCATGCGGCTTCGCTTACTACCATCAGACTTTTTCAG 22551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179646737038746