Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq133 138 2e-27 seq4 93.3 9e-14 >seq133 Length=80503 Score = 138 bits (152), Expect = 2e-27 Identities = 367/552 (66%), Gaps = 9/552 (2%) Strand=Plus/Plus Query 243208 CTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAG 243267 || ||||||||||| || | |||||| | | || ||||| | |||||| ||| Sbjct 15547 CTGTTCGACGCCATTGACACCATTCCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAA 15606 Query 243268 TGGCT---AGAACCCGGTAAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGC-GTTGA 243323 ||| | ||| | | ||||| | | ||||||| || || | | ||| ||||| Sbjct 15607 TGGATCGCAGATGATGCTTCGTCATTCGGTCAGCGTCTGGTAGCATTCGC-TGCTGTTGA 15665 Query 243324 AGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGAT 243383 ||||| | || || || ||| ||||||||| ||| || | ||| ||| | || Sbjct 15666 GGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGTTGAAGGCCAAGGGTCTCAT 15725 Query 243384 GCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTT 243443 |||||| | | || |||||||| ||| ||| ||||||||| | ||| | || Sbjct 15726 GCCTGGTTTGACCTTTTCCAACGAGTTGATCTCTCGAGACGAGGGCATGCACACCGACTT 15785 Query 243444 CGGTGAGCTTATGTATTCAA-AGCTCCAGAACAAGCTACCATTCGAAACGG-TCAAACAA 243501 | |||||| ||||| | ||| | |||||| | | | || | || || Sbjct 15786 TGCCT-GCTTATTACTTCAACACCTCAACCACAAGCCAG-ACCCCAAGCTCATCGAAGCC 15843 Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 ||||||||||| || |||| | ||| || |||||| | ||| ||| |||| || Sbjct 15844 ATCATCACAGAGGCCGTTGCCATCGAGAAAGAATTCTTGACCGATGCTCTTCCCTGTGCC 15903 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| ||||||||||| | | || ||| |||||| ||||| ||||| |||||||| || Sbjct 15904 CTTCTTGGCATGAACGCCAAGCTGATGCAACAGTATATCGAGTTCGTCGCCGACCGTCTT 15963 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | || | || | || || |||||| | | |||||||| ||| |||||| Sbjct 15964 CTCCTGGCCATGGGAAACAAGCGCGTCTACAACGCAACCAACCCCTTCAGCTTCATGGAG 16023 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| || ||| || || || ||||||||||| ||||| || |||| || || Sbjct 16024 AACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGAGTGGGTGACTACCAGAAG 16083 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 16084 GCTGGTGTCATG 16095 >seq4 Length=360590 Score = 93.3 bits (102), Expect = 9e-14 Identities = 306/464 (66%), Gaps = 15/464 (3%) Strand=Plus/Minus Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144 ||||| || || ||||| | ||||||| || || | || ||| ||||||| | | Sbjct 23005 ACGATTGGGGTAATGAATTCGACCAAGAACTTGGGGATCTTCAGGAGACTAGGGAA-CTG 22947 Query 298145 CTA--TGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGG 298202 || || |||||||| || | | ||| || ||| |||| || |||| ||| | Sbjct 22946 -TACTTGCAAAAAGTTGATCAACAAACCTTTGATATGACTTCCATCGTGATCCTGGTCAG 22888 Query 298203 TCATGATCATCACATGACCGTAACGAAGCGAGGACGTGTCTTTGTACACTTTACCGGTTT 298262 |||||||||||| ||||||||||||||| ||||| |||| || || | || Sbjct 22887 TCATGATCATCAAATGACCGTAACGAAGGCCTTGTGTGTCGGTGTAGACCTTCTTGTGTT 22828 Query 298263 GAAGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCA 298319 | || || | ||| || || | ||| || ||| | ||||| | ||| ||| | | Sbjct 22827 GGAGACCAAGGAAATTCTTGATGTTCTG-AATCTCTGCATTCTTGGAGAT--TTGATCGA 22771 Query 298320 CGGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGC 298379 | || || || || ||||| | | ||||||||||| ||||| || ||| | || Sbjct 22770 CAGAGGCGTCACGAACATTGAGCAACTTTCCACGAAGCGGGAAAACCCCAAACAAATCCG 22711 Query 298380 GACCGACCACGGACAGCCCTGCGATTGCAAGTGTCGCT-GCGGAATCCCCCTCCGTCAGA 298438 |||| || ||||| | ||||| || ||||| | | | || ||||| || || || || Sbjct 22710 GACCAACAACGGAACGACCTGCCATGGCAAG-GCCTTTGGCTGAATCACCTTCAGTAAGG 22652 Query 298439 ATGAGAGTGCACATTTTGCTGTTATTCGTTCCAGCCCATGTAGCATCGTTGAGTTTGGGA 298498 || || || ||| | | || | ||||| ||| | || ||| | ||||||||| Sbjct 22651 ATTAGGGTACACTTGTGGCCTTCTCGGGTTCCGGCCTTGTTGGCGTCGGTCAGTTTGGGA 22592 Query 298499 ATTCCAGTCACTCGGATCTTCTTGGTACCGTCGGTCTTCTTCAG 298542 | | ||| ||| | ||| |||| || | ||| ||||| Sbjct 22591 TT---ATTCATGCGGCTTCGCTTACTACCATCAGACTTTTTCAG 22551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102872835760450