Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq168 87.8 2e-12 seq70 86.0 6e-12 seq8 82.4 8e-11 >seq168 Length=68123 Score = 87.8 bits (96), Expect = 2e-12 Identities = 139/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 138419 TTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGG 138478 |||||||||| ||||||||||||||| | ||| || || || | ||||| |||| Sbjct 27554 TTGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTTCGACCATCTTCCAACTGTTTGCCGG 27613 Query 138479 AATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA 138538 |||| | ||||||||||| || || ||||| ||||| || ||| || || | Sbjct 27614 CGAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCTTTATCTTGGATCTTGGACTTGA 27673 Query 138539 -ATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTT 138597 |||| || | |||||||| ||||| || || | || | || || || || || || Sbjct 27674 CATTG-TCGATGGTGTCGGATGACTCGACTTCCAAAGTGATTGTCTTGCCTGTGAGGGTC 27732 Query 138598 TTTACAAAAATCTGCAT 138614 || ||||| || ||||| Sbjct 27733 TTGACAAAGATTTGCAT 27749 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| | ||| || ||||| | | | ||||||||| |||||||||||| Sbjct 27295 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 27354 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || ||||| | ||| || || | | |||| | ||||| || || || || Sbjct 27355 AGAGTTCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGATCGGGTGGG 27414 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| ||| || | |||| || | ||||||| || || || Sbjct 27415 ATTCCCTCCTTGTCTTGGATCTTTGACTTGACATTG-TCGATCGTGTCGGATGATTCGAC 27473 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| || ||||| || ||||||||||| Sbjct 27474 TTCTAGAGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/195 (70%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || || || || ||||||||||| | ||| || || || | |||||||||| Sbjct 27784 GATTCTTTCTGGATGTTGTAGTCTGATAGAGTTCGACCATCTTCCAACTGTTTACCGGCG 27843 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| | ||||||||||| ||||| ||||| ||||| || ||| || || | | Sbjct 27844 AAGATCAATCGCTGTTGGTCAGGAGGAATACCCTCTTTATCTTGGATCTTGGACTTAACA 27903 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | ||| ||| | ||||||||||||| || | || || || || ||||| || Sbjct 27904 TTG-TCAATGGTATCGCTAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTT 27962 Query 138600 TACAAAAATCTGCAT 138614 || || || ||||| Sbjct 27963 GACGAAGATTTGCAT 27977 >seq70 Length=128403 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/183 (72%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 ||||||| |||||||| ||||| | || || || || ||||| || |||| | ||| Sbjct 69733 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAGA 69674 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--TTG 138542 | | ||||| ||||| ||||| || ||||| ||||| ||| | || | || | ||| Sbjct 69673 TCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCT-TGAATCTTGGACTTGACATTG 69615 Query 138543 TTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTAC 138602 | | | |||||||| |||||||||||| | || | || || || || || || || || Sbjct 69614 T-CGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGAC 69556 Query 138603 AAA 138605 || Sbjct 69555 GAA 69553 >seq8 Length=306822 Score = 82.4 bits (90), Expect = 8e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | || ||||| | | | |||||||| || ||||||||||| Sbjct 208476 GCCACCACGAAGACGAAGGACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 208535 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 || || || |||||||||||| || |||| |||| ||||| || ||||| || || Sbjct 208536 CAGGGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGTGG 208595 Query 138507 TATACCTTCTTTGTC 138521 || ||||| ||||| Sbjct 208596 GATGCCTTCCTTGTC 208610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496259254937040