Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq133 145 7e-30 seq168 116 4e-21 seq70 84.2 2e-11 >seq133 Length=80503 Score = 145 bits (160), Expect = 7e-30 Identities = 350/522 (67%), Gaps = 21/522 (4%) Strand=Plus/Plus Query 47066 CATGCCCTGCGTGCGCAGAAAGGCCGAGTGGGCCATGAAGTACATTGAAAACGAAAA--C 47123 ||| |||||| | |||| |||||||| ||||| |||| | || | | | || | Sbjct 15567 CATTCCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAATGGATCGCAGATGATGCTTC 15626 Query 47124 GTCACTCTGGCCGAACGTTTGATCGCTTTCGCCATCGTCGAGGGCGTCTTCTTCTCGGGC 47183 |||| || | | | ||| || | || ||||| || ||||| |||||||||| ||| Sbjct 15627 GTCATTCGGTCAG--CGTCTGGTAGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGC 15684 Query 47184 AGCTTTGCGGCGATATTTTACATGAAAACCAAAGGAGTTATGCCCGGCCTCACGTTTAGC 47243 || || || || || | |||| |||| || | ||||| || | || ||| | Sbjct 15685 TCATTCGCCGCCATCTTCTGGTTGAAGGCCAAGGGTCTCATGCCTGGTTTGACCTTTTCC 15744 Query 47244 AACGAGCTAATCTCGAGAGACGAAGGCCTGCACACCAACTTTGCCTGTCTCT-ACTACAA 47302 |||||| | ||||| ||||||| ||| |||||||| |||||||||| | | ||| ||| Sbjct 15745 AACGAGTTGATCTCTCGAGACGAGGGCATGCACACCGACTTTGCCTGCTTATTACTTCAA 15804 Query 47303 CACTAGAGTCGATCAAAAGTTGGACGTGCCCACCGTCAGCGA---CATGTTTGCCGAAGC 47359 ||| || | || ||| ||| |||| ||| ||| ||| | | || || Sbjct 15805 CACC----TCAACCACAAGCCAGAC---CCCAAGCTCATCGAAGCCATCATCACAGAGGC 15857 Query 47360 CGTCGCCATTGAGATGGAGTTTTTCGCCGAGGCTCTGCCCGAATCTTTAGTGGGAATGAA 47419 ||| ||||| |||| || || || |||| ||||| ||| | | | || ||||| Sbjct 15858 CGTTGCCATCGAGAAAGAATTCTTGACCGATGCTCTTCCCTGTGCCCTTCTTGGCATGAA 15917 Query 47420 CGCGGAGATGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTC--GTTCA-GCT 47476 ||| || ||||| | |||| ||||| || ||||||||||| || ||| | || | Sbjct 15918 CGCCAAGCTGATGCAACAGTATATCGAGTTCGTCGCCGACCGTCTTCTCCTGGCCATGGG 15977 Query 47477 AAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACATTTCGCT 47536 ||| | | | | ||| || | || || ||| || ||| | ||||| || || Sbjct 15978 AAACAAGCGC---GTCTACAACGCAACCAACCCCTTCAGCTTCATGGAGAACATCTCCCT 16034 Query 47537 CGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATA 47578 | |||||||||||||| ||||||||||| || || || || Sbjct 16035 TGCTGGCAAGACCAACTTCTTCGAGAAGCGAGTGGGTGACTA 16076 >seq168 Length=68123 Score = 116 bits (128), Expect = 4e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || |||||||||||| | || ||| ||||| || ||||| ||| Sbjct 27295 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAG 27354 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || | || || || || |||||||||||||||||||||| || Sbjct 27355 AGAGTTCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGATCGGGTGGG 27414 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||||||||| ||| || ||||| | |||| ||||| | |||||| Sbjct 27415 ATTCCCTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGATGATTCGACT 27474 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || || ||||| || ||||||||||| Sbjct 27475 TCTAGAGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| |||| || | ||| | ||| | || ||||| || ||||| ||||| ||| Sbjct 27523 CCACCTCGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGAG 27582 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || | |||||| || ||| ||||||||||||| || || || || Sbjct 27583 AGAGTTCGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGA 27642 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| || || ||| || ||||| | |||| |||||| | ||||||| Sbjct 27643 ATACCCTCTTTATCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGATGACTCGACT 27702 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | || | || ||||| || || || || ||||| || ||||| Sbjct 27703 TCCAAAGTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | |||| || | ||| | || || ||||| || || ||||| || Sbjct 27751 CCACCACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 27810 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || ||| ||| || | |||||| || ||| ||||||||||||| || || ||||| Sbjct 27811 AGAGTTCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGA 27870 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || ||||| || || ||| || ||| | | || | ||| || || ||| || Sbjct 27871 ATACCCTCTTTATCTTGGATCTTGGACTTAACATTGTCAATGGTATCGCTAGACTCCACC 27930 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | || || ||||| ||||| || || || || ||||| Sbjct 27931 TCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977 >seq70 Length=128403 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 126926 TTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATC 126985 ||||| || |||||||||| | ||||| ||| || || || ||||| || ||||| Sbjct 69731 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAGATC 69672 Query 126986 AATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCG 127045 ||||||||||| || ||||| || || |||||||| || || ||||| | ||| Sbjct 69671 AATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 69612 Query 127046 ACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAA 127104 | |||||| | ||| || || | ||| | || ||||| || || || || || || Sbjct 69611 ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 69553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475497786513680