Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq168 138 1e-27 >seq168 Length=68123 Score = 138 bits (152), Expect = 1e-27 Identities = 172/235 (73%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 45108 TTTATT--CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTAT 45165 |||||| || || || || |||||||| | |||||| || ||||||||||| || | Sbjct 27287 TTTATTGACCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGT 27346 Query 45166 AATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGT 45225 | ||| || ||| | ||| |||||||| || ||||| | |||||||| ||||| | Sbjct 27347 AGTCGGAGAGAGTTCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGAT 27406 Query 45226 CCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAG 45285 | || || || || || || ||||| || ||| |||| || | |||||||| | Sbjct 27407 CGGGTGGGATTCCCTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGATG 27466 Query 45286 ACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | |||||||| ||||||| || ||||| ||||| ||||| || ||||| ||||| Sbjct 27467 ATTCGACTTCTAGAGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 Score = 136 bits (150), Expect = 4e-27 Identities = 168/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || || | ||| ||||| || ||||| ||||| || || || || ||| Sbjct 27520 ATACCACCTCGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCG 27579 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| | ||| ||||| ||||| || ||| | |||||||| || ||||| || Sbjct 27580 GAGAGAGTTCGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGT 27639 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| || ||||||||||| || || |||| || | ||||||||| |||||| Sbjct 27640 GGAATACCCTCTTTATCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGATGACTCG 27699 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||| | || ||||| || || || || ||||| |||||||| Sbjct 27700 ACTTCCAAAGTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749 Score = 111 bits (122), Expect = 1e-19 Identities = 165/232 (71%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | || || ||||| || || ||||| || ||||| || || || Sbjct 27748 ATACCACCACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTC- 27806 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 ||| | || || ||| ||||| ||||| || ||| | |||||||| || ||||| | Sbjct 27807 -TGATAGAGTTCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAG 27865 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| || ||||||||||| || || || | || | ||| ||| ||||| Sbjct 27866 GAGGAATACCCTCTTTATCTTGGATCTTGGACTTAACATTGTCAATGGTATCGCTAGACT 27925 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | || ||||| || | || || ||||| ||||| || || || |||||||| Sbjct 27926 CCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977 Score = 82.4 bits (90), Expect = 7e-11 Identities = 144/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||||| || |||||||||||||| || |||||| Sbjct 27976 ATACCACCACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCG 28035 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| || || | ||| || || || | || | |||||||| ||||| Sbjct 28036 CTTAGGGTACGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATAAGGCGTTGCTGATCCGGA 28095 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| ||||| || || || |||| || | || | |||||| ||||| Sbjct 28096 GGAATGCCTTCCTTATCCTGGATCTTGGACTTGA-CGTTGTCAATAGTGTCGCTGGACTC 28154 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGT 45316 || || || || | || || ||||| Sbjct 28155 CACCTCAAGGGTGATGGTCTTTCCGGT 28181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452000335429720