Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq22 109 2e-18 seq168 107 8e-18 seq117 87.8 7e-12 seq70 84.2 9e-11 >seq22 Length=236392 Score = 109 bits (120), Expect = 2e-18 Identities = 192/276 (70%), Gaps = 13/276 (5%) Strand=Plus/Minus Query 451331 ACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATT 451390 || || || |||||||||||||| ||| | ||||| || |||||||| || || ||| Sbjct 189235 ACCGTGCCTGCTTATTTCAATGACATGCAAAGACAAGCCACCAAAGATGCTGGTCAGATT 189176 Query 451391 GCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGA 451450 ||||| | || || ||||| || | || ||||| || || ||||| ||||| ||||| Sbjct 189175 GCTGGCCTCAACGTCCTTCGTGTTGTCAACGAACCCACTGCTGCTGCCCTAGCCTATGGT 189116 Query 451451 CTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGA 451510 || | ||||| | ||| || | |||| || | |||| ||||||| || Sbjct 189115 CTCG-------AAAAGGA--AGAGGACCGAGTTATTGCTGTCTATGATCTTGGTGGTGGT 189065 Query 451511 ACTCATGATACTTCTGTACTTTC-AATTGAAGATGGG-GTATTTGAAGTAAAGGCAACCA 451568 || |||| ||| | | || || | ||| ||| || |||||||| ||| | |||| Sbjct 189064 ACCTTCGATA--TCTCCATTCTCGAAATCCAGAAGGGTGTCTTTGAAGTCAAGTCTACCA 189007 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATA 451604 | ||||| ||||| | || || |||||| | |||| Sbjct 189006 ACGGTGACACTCACTTGGGTGGCGAAGATTTCGATA 188971 >seq168 Length=68123 Score = 107 bits (118), Expect = 8e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || ||||| || ||||||||||| || || |||||||| Sbjct 27521 ATGCAGATTTTCGTCAAAACCCTAACTGGCAAGACTATTACTCTAGAAGTCGAATCATCC 27462 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || | | || ||| || ||||| ||||| ||||| || || ||||| Sbjct 27461 GACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGAATCCCACCCGATCAG 27402 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || || || || |||| || ||| | || ||||| ||||| | | || || || Sbjct 27401 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAGGATGGTCGAACTCTCTCCGACTACAAC 27342 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTG 391268 || | ||||| || || || || || || |||||| Sbjct 27341 ATCCAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACTG 27303 >seq117 Length=91695 Score = 87.8 bits (96), Expect = 7e-12 Identities = 242/369 (66%), Gaps = 3/369 (1%) Strand=Plus/Plus Query 451235 ACTTTTGCTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAA 451294 |||||| | |||||||| |||| | |||||| | || ||||| ||| ||||| Sbjct 5706 ACTTTTACCCCTGAAGAGGTTTCGGCCATGGTTTTGGGCAAGATGAAGGAAGTCGCAGAG 5765 Query 451295 CAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGAT 451354 ||| | || ||| || | || || | || || || || |||||||| || Sbjct 5766 TCATACCTCGGCAAGAAAGTCACCCACGCCGTCGTCACGGTCCCAGCCTATTTCAACGAC 5825 Query 451355 GCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATT 451414 || || || || || || ||||| || || || ||||| | |||||| || | Sbjct 5826 AATCAGCGACAGGCTACAAAGGATGCTGGTGTGATCGCAGGTTTGACTGTTCTCCGCGTC 5885 Query 451415 ATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAA 451474 | || || ||||| || || ||| | ||||||||||| | | | | || || | | Sbjct 5886 GTCAACGAGCCTACGGCCGCAGCTATCGCATATGGACTCG--ACAAGACCAGCAAGA-AG 5942 Query 451475 GaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCA 451534 |||| | || | || | ||| | ||||| || ||| ||| ||| | || ||| Sbjct 5943 GAAAGCCAAATCATCGTCTACGATCTCGGTGGTGGCACTTTCGATGTCTCTCTGCTCTCA 6002 Query 451535 ATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAA 451594 ||||| || || || || || || ||| || ||||||||| ||||| || |||||| Sbjct 6003 ATTGACGACGGTGTTTTCGAGGTCCTGGCTACTGCTGGTGATACCCATCTTGGTGGTGAA 6062 Query 451595 GATATTGAT 451603 ||| | ||| Sbjct 6063 GATTTCGAT 6071 >seq70 Length=128403 Score = 84.2 bits (92), Expect = 9e-11 Identities = 108/149 (72%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 391059 TTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATT 391118 ||||| || || || || || || || || || ||||| || || || || || | ||| Sbjct 69553 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACCATC 69612 Query 391119 GAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTA 391178 || | | || || |||||||| ||||||||||||||||| || || || || || Sbjct 69613 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCAGACCAGCAGCGATTG 69672 Query 391179 ATTTTCTCAGGGAAACAACTTGAAGATGG 391207 || || | || || |||||||||||||| Sbjct 69673 ATCTTTGCCGGAAAGCAACTTGAAGATGG 69701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975705565856756