Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq66 134 1e-25 seq117 107 2e-17 seq168 104 2e-16 seq22 100 2e-15 >seq66 Length=133398 Score = 134 bits (148), Expect = 1e-25 Identities = 458/703 (65%), Gaps = 13/703 (2%) Strand=Plus/Minus Query 551895 GCTCTTCGTCGTCTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACT 551954 || || || ||||| | |||||||||||| | ||||| || ||||||| || | || Sbjct 26364 GCCCTCCGACGTCTCCGCACTGCTTGCGAACGTGCCAAGCGCACTCTTTCTTCGTCTGCT 26305 Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG 552014 || ||| | || ||| | || || | || || || || || | | || | || | Sbjct 26304 CAGACCTCGATCGAAATCGACTCTCTTTTCGAAGGCATCGACTTCTACACCTCAATCACT 26245 Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 | ||| ||| ||||| |||| || ||||| | || || || || || || Sbjct 26244 CGTGCCCGATTCGAAGAACTTTGCCAGGACCTCTTCCGCTCCACCATGGACCCCGTCGAG 26185 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 | || | | || | |||||||| || |||| || || || || || || ||||| Sbjct 26184 CGTGTCCTCCGCGACGCCAAGATTGACAAGTCCAGCGTTCACGAGATCGTCCTCGTTGGA 26125 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAA--TGTTAAGTTCTTATTTCAATGGTAAAA 552192 || ||||| | || || || | ||| |||| ||| || ||| || || Sbjct 26124 GGCTCTACCCGTATCCCACGTATCCA-GAAGCTTGTTTCTGACTTCTT-CAACGGAAAGG 26067 Query 552193 AATTAAATGAAAGTG--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGC 552250 | || |||| | || || ||||||||||||||||| |||||||| | ||||| Sbjct 26066 AGCCCAAC--AAGTCCATCAACCCCGATGAGGCTGTTGCCTACGGTGCCGCTGTCCAAGC 26009 Query 552251 AGCTATTCTTTCTGGACAAAC-TGATGAAAAACTACAAA--ATATTGTACTTGTAGATGT 552307 ||| |||||||| ||| | || | | ||| |||| || | || | || | ||||| Sbjct 26008 AGCCATTCTTTCCGGAGATACTTCCTCGAAATCTACCAACGAAATCCTTCTCTTGGATGT 25949 Query 552308 TACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAG 552367 | | || || ||| | ||| | || || | ||||||| | ||||| || ||| | | Sbjct 25948 TGCCCCACTCTCTGTCGGTATTGAGACTGCTGGAGGTGTCATGACCGCACTCATCAAGCG 25889 Query 552368 AAATACTACTATTCCTTGTAAAAAATCTCGTGTATTT-TCTACGTATTCAGATAATCAAA 552426 ||| || ||| |||| || || ||| | | ||| || || | ||| || || ||| Sbjct 25888 AAACACCACTGTTCCAACCAAGAAGTCT-GAGACTTTCTCCACCTTTTCTGACAACCAAC 25830 Query 552427 CTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAAC 552486 | | ||| || ||| | | || || || | ||| || || || || | | Sbjct 25829 CCGGTGTGCTCATCCAAGTCTACGAGGGTGAGCGTGCTCGCACCAAGGACAACAACCTTC 25770 Query 552487 TTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAG 552546 | || | ||| | || |||||||||||||| |||||||| || || || || || | Sbjct 25769 TCGGCAAGTTTGAATTGTCCGGTATTCCTCCTGCGCCTCGTGGCGTTCCTCAGATCGAGG 25710 Query 552547 TTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 |||| |||||| | |||||||| || || ||||||| |||| Sbjct 25709 TTACCTTCGATGTTGATGCCAACGGTATCATGAATGTCTCTGC 25667 >seq117 Length=91695 Score = 107 bits (118), Expect = 2e-17 Identities = 137/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTT 550054 || ||||| || || |||||||||||| ||| || ||||| ||| ||||| |||||| Sbjct 5332 ATCGGTATTGACTTGGGAACCACATATTCTTGCGTCGGTGTGATGCAGAATGGAAAAGTT 5391 Query 550055 GAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGAA 550114 ||||| |||| ||| || ||||| ||||||| ||| || || ||||| | || || || Sbjct 5392 GAAATCATTGTCAACGACCAAGGAAACAGAATTACCCCCTCATATGTGGCCTTTACCGAC 5451 Query 550115 ACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATACT 550174 |||| || ||||| || || ||||| |||| | |||||||| | || Sbjct 5452 GAGGAACGGTTGGTTGGCGACGCTGCAAAGAATCAGTATGCGTCAAATCCTACAAGAACG 5511 Query 550175 ATTTTTGAT 550183 ||||||||| Sbjct 5512 ATTTTTGAT 5520 >seq168 Length=68123 Score = 104 bits (114), Expect = 2e-16 Identities = 157/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||| || || ||||||||||| || |||||| || ||||| || | |||||||| Sbjct 27759 GAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGAGTTCG 27818 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| | ||||| ||||| || || | || || || ||||||||||| || || Sbjct 27819 ACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGAATACCCTC 27878 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||||||||| || || || || ||||| ||||| | || | || ||||| | Sbjct 27879 TTTATCTTGGATCTTGGACTTAACATTGTCAATGGTATC-GCTAGACTCCACCTCGAGGG 27937 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || || || ||||| || ||||| ||||||||| Sbjct 27938 TGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCATA 27978 Score = 93.3 bits (102), Expect = 3e-13 Identities = 104/137 (76%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTC--TTTGGTAATATTGTAATCAGCTAGAGTT 563313 |||||| || |||||||| | |||| ||| ||||| || |||||||| ||| || Sbjct 27987 GAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGG--ATGTTGTAATCGCTTAGGGTA 28044 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 | ||||||||||| || || ||||| ||||| | ||||||||| |||||||| ||| Sbjct 28045 CGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATAAGGCGTTGCTGATCCGGAGGAATGCCT 28104 Query 563374 TCTTTATCTTGAATTTT 563390 || ||||| || || || Sbjct 28105 TCCTTATCCTGGATCTT 28121 >seq22 Length=236392 Score = 100 bits (110), Expect = 2e-15 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 || || || || ||||| |||||| ||| | ||||| || ||||||||||| | ||| Sbjct 189235 ACCGTGCCTGCTTATTTCAATGACATGCAAAGACAAGCCACCAAAGATGCTGGTCAGATT 189176 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || || || |||||| || |||| ||||| ||||||||||| || || ||||| Sbjct 189175 GCTGGCCTCAACGTCCTTCGTGTTGTCAACGAACCCACTGCTGCTGCCCTAGCCTATGGT 189116 Query 550529 CTTGATAA 550536 || || || Sbjct 189115 CTCGAAAA 189108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029269187553430