Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq66 111 1e-18 seq168 98.7 6e-15 seq70 98.7 6e-15 >seq66 Length=133398 Score = 111 bits (122), Expect = 1e-18 Identities = 196/283 (69%), Gaps = 2/283 (1%) Strand=Plus/Minus Query 474638 GGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAA 474697 || ||||| || |||| |||| ||| |||| ||||| ||| | || |||| ||| | Sbjct 26814 GGCGAAACCAAGACATTTACACCCGAAGAAATCTCTTCGATGATCTTGACCAAGATGCGA 26755 Query 474698 CAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGC 474756 | || || ||| ||||||||||| || | | ||||| | || ||||| || Sbjct 26754 GAGACTGCCGAG-TCATATCTTGGTGGCACCGTCAACAACGCAGTTGTCACAGTTCCTGC 26696 Query 474757 ATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAA 474816 || || || || ||||| |||||||| || || ||||| || ||||| ||||| || Sbjct 26695 CTACTTCAACGACTCTCAGCGTCAAGCCACCAAGGATGCCGGTCTCATTGCCGGTCTCAA 26636 Query 474817 TGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || | ||||| || || ||||| || || ||||| |||| || ||||| || || || Sbjct 26635 CGTCCTCCGTATCATCAACGAACCCACTGCTGCCGCTATTGCGTACGGTCTCGACAAAAA 26576 Query 474877 TTCTGACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGGT 474919 |||| || ||||||| | ||||| ||| ||| ||| Sbjct 26575 GACTGAGGGTGAGCGAAATGTTCTCATCTTCGATCTTGGTGGT 26533 >seq168 Length=68123 Score = 98.7 bits (108), Expect = 6e-15 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || |||||||| | ||| ||| || | || ||||| ||| || Sbjct 27984 ACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGT 28043 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | | |||||||||||||| |||||||| ||||| ||||| ||||| |||||||| || Sbjct 28044 ACGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATAAGGCGTTGCTGATCCGGAGGAATGCC 28103 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 |||||| || || ||||| ||||| |||||||| || Sbjct 28104 TTCCTTATCCTGGATCTTGGACTTGACGTTGTCAATAGTGTC 28145 Score = 93.3 bits (102), Expect = 3e-13 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || || || ||||||||||| || |||||| | || || || | |||||| Sbjct 27756 ACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGAGT 27815 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || |||||| | || || || || || || | || ||||| ||||||||||| || Sbjct 27816 TCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGAATACC 27875 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGT-GTGTGAAGTTTCAA 480729 || || ||||| ||||| || ||| ||||| ||||| | | | | || | Sbjct 27876 CTCTTTATCTTGGATCTTGGACTTAACATTGTCAATGGTATCGCTAGACTCCA-CCTCGA 27934 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||| || || || |||||||||||||| ||||| ||||| Sbjct 27935 GGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTG 27974 >seq70 Length=128403 Score = 98.7 bits (108), Expect = 6e-15 Identities = 112/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 |||||||||||||||||| ||||| || | || || || || ||||||||||||||||| Sbjct 69699 ATCTTCAAGTTGCTTTCCGGCAAAGATCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTT 69640 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGGTAA 480735 |||||||||||| |||||| || || || || | | | | |||||||| | Sbjct 69639 GTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCA-CCTCAAGGGTGA 69581 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAA 480763 | || || || ||||| ||||| ||||| Sbjct 69580 TGGTCTTGCCCGTGAGGGTCTTGACGAA 69553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268157452310036