Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq168 140 6e-28 seq70 86.0 1e-11 >seq168 Length=68123 Score = 140 bits (154), Expect = 6e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||| | || ||| || ||||| | || | ||| || ||| || |||||| Sbjct 27520 ATACCACCTCGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCG 27579 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | |||| | ||| || || ||||| ||||| || || |||| |||||| ||||| Sbjct 27580 GAGAGAGTTCGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGT 27639 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||||||||| || |||| || | ||| || || ||||| ||||| Sbjct 27640 GGAATACCCTCTTTATCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGATGACTCG 27699 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | ||| || || || ||||| || || || ||||| |||||||| Sbjct 27700 ACTTCCAAAGTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749 Score = 123 bits (136), Expect = 4e-23 Identities = 169/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| |||||||| | | || || || ||||| | || | ||||| || || Sbjct 27742 ATTTGCATACCACCACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTG 27801 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| |||| |||| | ||| || || ||||| ||||| || || |||| |||||| Sbjct 27802 TAGTCTGATAGAGTTCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGG 27861 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 |||||||| || || ||||||||||| || |||| || | ||| ||| |||||| | Sbjct 27862 TCAGGAGGAATACCCTCTTTATCTTGGATCTTGGACTTAACATTGTCAATGGTATCGCTA 27921 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| || || || || || || || || || || || || || || |||||||| Sbjct 27922 GACTCCACCTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977 Score = 120 bits (132), Expect = 5e-22 Identities = 168/236 (71%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||||| |||||| | || || | |||| ||||| || ||| || || || Sbjct 27286 ATTTATTGACCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTG 27345 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||||| | |||| | ||| || ||||| || || ||||| || |||| ||| ||| Sbjct 27346 TAGTCGGAGAGAGTTCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGA 27405 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || ||||| || || ||||| || || | || | ||| || || ||||| Sbjct 27406 TCGGGTGGGATTCCCTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGAT 27465 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||||||||| ||||| || || ||||| ||||| || || || ||||| Sbjct 27466 GATTCGACTTCTAGAGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 >seq70 Length=128403 Score = 86.0 bits (94), Expect = 1e-11 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| || | ||| ||||||||||| || |||| ||| || || ||||| |||||||| || Sbjct 69699 ATCTTCAAGTTGCTTTCCGGCAAAGATCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTT 69640 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| || |||| || | ||| || || ||||| ||||| || || || || || Sbjct 69639 GTCTTGAATCTTGGACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGAT 69580 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAA 193351 || || || || || || || || || Sbjct 69579 GGTCTTGCCCGTGAGGGTCTTGACGAA 69553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899648698440240