Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq253 147 3e-29 seq72 136 5e-26 seq133 107 2e-17 >seq253 Length=35521 Score = 147 bits (162), Expect = 3e-29 Identities = 110/129 (85%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 |||||||| | || |||||||||||||||||||||||||| ||||| || ||| |||| Sbjct 5603 CTCTTTGAAATCATTCTCGCCGCCAACTACCTCGACATCAAACCTCTTCTGGATGTTGGA 5662 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 |||||| | || ||||| |||||||| |||||||| || |||||||| ||||||||||| Sbjct 5663 TGCAAGACAGTTGCCAATATGATCAAAGGCAAGTCTCCAGAGGAGATTCGCAAGACCTTC 5722 Query 1592288 AACATCAAG 1592296 |||||| || Sbjct 5723 AACATCCAG 5731 >seq72 Length=126438 Score = 136 bits (150), Expect = 5e-26 Identities = 186/260 (72%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||||||||||||||| || |||| ||| ||||| | |||||||| | ||||||||| || Sbjct 93122 CTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGGGGATGAGGCCGTTTGA 93063 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 ||||||||| || || | |||| ||| | ||| || | || ||| | || Sbjct 93062 TGTGCCGTTGGTTCCGGCGATATAGGAGCCCGTGGCACGAATGCAATGAGCGTTGAGACC 93003 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 || |||||||| | ||||||||| | || || |||||| || || |||||||| || Sbjct 93002 AATACCGCCGGCGGTCTTGGAGATCATTGCACAGGTTTTGAGAGTATCATAGATGCCTTC 92943 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCC 1630304 || ||| | ||||||||| | | ||||| || || || || || | ||||| Sbjct 92942 AATGCTGTCAGACTTCATGTCAATCAAGAAGCAAGATGACAACTGGGGTTGAGGAGTGCC 92883 Query 1630305 GGCGTTGAAGAGCGTGGGCG 1630324 ||||||||||| || |||| Sbjct 92882 AGCGTTGAAGAGGGTTGGCG 92863 Score = 96.9 bits (106), Expect = 4e-14 Identities = 118/160 (74%), Gaps = 1/160 (1%) Strand=Plus/Plus Query 19044 GAGGACAGCATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGC 19103 ||||||||||| || || || ||||| || ||| || ||||| || || || || Sbjct 86062 GAGGACAGCATTGGAGGAACCGTGACTTGTGTGATGCGAAACGTACCAATCGGGCTGGGA 86121 Query 19104 GAGCCGTGCTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCC 19163 ||||| ||||||||||| | || || | || || ||||||||||| || || ||| Sbjct 86122 GAGCCTTGCTTTGACAAACTTGAAGCAACACTTGCACACGCCATGCTCAGTATTCCCGCC 86181 Query 19164 ACCAAGGGATTCGAGATTGGCAGCGGGTTTGCGGG-TGCG 19202 ||||| |||||||||||||| || |||| ||| |||| Sbjct 86182 ACCAAAGGATTCGAGATTGGGTCAGGATTTGGGGGATGCG 86221 Score = 93.3 bits (102), Expect = 5e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 1628447 GCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCT 1628506 |||| ||||| || |||||||| ||||| || ||||| || || || || |||| Sbjct 93276 GCATGAAGAGATCGGGTGTCCACAGGGCGTAGAACAGGTCACGAGCACGAACTTCTTCCT 93217 Query 1628507 TGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGT 1628566 ||||||| |||||| | |||| ||||| |||| | ||||||||||| || |||| || Sbjct 93216 TGCCGTGATTCTTTCTCAGGTTCAGCCACTCGAAGACATCGGCGTGCCATGGTTCCAAGT 93157 Query 1628567 AGCAGGCAAAGGCGCC 1628582 | ||||||||| || Sbjct 93156 AAATGGCAAAGGCACC 93141 >seq133 Length=80503 Score = 107 bits (118), Expect = 2e-17 Identities = 171/243 (70%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| ||| || ||||| ||| |||||| |||||||||||||| | || ||||| Sbjct 16085 GCCTTCTGGTAGTCACCCACTCGCTTCTCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATG 16026 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGT-GCTTTTCGCATCCGAGCGACGC 868809 |||||| | ||| ||||||| | |||||| || || | ||| | | | Sbjct 16025 TTCTCCATGAAGCTGAAGGGGTTGGTTGCGTTGTAGACGCGCTT-GTTTCCCATGGCCAG 15967 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 ||| || ||||||||||| |||||||| ||||| ||| || |||||||||||| | Sbjct 15966 GAGAAGACGGTCGGCGACGAACTCGATATACTGTTGCATCAGCTTGGCGTTCATGCCAAG 15907 Query 868870 GAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGAT 868929 || || || || | ||| ||| || ||||||||||| | |||||||| ||| Sbjct 15906 AAGGGCACAGGGAAGAGCATCGGTCAAGAATTCTTTCTCGATGGCAACGGCCTCTGTGAT 15847 Query 868930 GAT 868932 ||| Sbjct 15846 GAT 15844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107097593205719