Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq253 129 9e-24 seq72 98.7 2e-14 seq133 87.8 3e-11 >seq253 Length=35521 Score = 129 bits (142), Expect = 9e-24 Identities = 106/129 (82%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 2035629 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCCCTCCTCGATTTGGGG 2035688 |||||||| | || |||||||||||||||||||||||||| || || || ||| | || Sbjct 5603 CTCTTTGAAATCATTCTCGCCGCCAACTACCTCGACATCAAACCTCTTCTGGATGTTGGA 5662 Query 2035689 TGCAAGACCGTGGCCAACCTTATCAAGGGCAAGTCGCCCGAGGACATCCGCAAGACCTTT 2035748 |||||||| || ||||| | ||||| |||||||| || ||||| || ||||||||||| Sbjct 5663 TGCAAGACAGTTGCCAATATGATCAAAGGCAAGTCTCCAGAGGAGATTCGCAAGACCTTC 5722 Query 2035749 AACATCAAG 2035757 |||||| || Sbjct 5723 AACATCCAG 5731 >seq72 Length=126438 Score = 98.7 bits (108), Expect = 2e-14 Identities = 111/148 (75%), Gaps = 2/148 (1%) Strand=Plus/Minus Query 2071847 TCACCACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCC 2071906 ||| ||||| || || || || ||| ||||||||| |||| || || || || || | Sbjct 93286 TCAACACGCTGC--ATGAAGAGATCGGGTGTCCACAGGGCGTAGAACAGGTCACGAGCAC 93229 Query 2071907 GGTTCTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCC 2071966 | || ||||||||||| |||||| |||||| ||||| |||| || |||||||||| Sbjct 93228 GAACTTCTTCCTTGCCGTGATTCTTTCTCAGGTTCAGCCACTCGAAGACATCGGCGTGCC 93169 Query 2071967 ACGGCTCCAGGTAGCAGGCAAAGGCGCC 2071994 | || |||| ||| ||||||||| || Sbjct 93168 ATGGTTCCAAGTAAATGGCAAAGGCACC 93141 >seq133 Length=80503 Score = 87.8 bits (96), Expect = 3e-11 Identities = 201/299 (67%), Gaps = 9/299 (3%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTT- 794399 || ||||| ||| |||||| |||||| |||| | || |||||||| || ||| Sbjct 15770 CCCTCGTCTCGAGAGATCAACTCGTTGGAAAAGGTCAAACCAGGCATGAGACC---CTTG 15714 Query 794400 --CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457 ||| | ||| |||||||| ||| ||| ||||| ||||| ||||| || || || Sbjct 15713 GCCTTCAACCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATACCCTCAACAGCAGCG 15654 Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCC 794517 || | || || |||| | || || | | || | || |||||| |||| ||| Sbjct 15653 AATGCTACCAGACGCTGACCGAA--TGACGAAGCATCATCTGC-GATCCATTTCAAAGCC 15597 Query 794518 CACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTC 794577 || || ||||| || | | |||| | ||||| |||||| || || | | ||| Sbjct 15596 CAGTCGGCCTTCTTGCGGATGCAGGGAATGGTGTCAATGGCGTCGAACAGATAGGTCTTT 15537 Query 794578 TCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTT 794636 | |||||||||| ||| ||||||||||| | ||| |||| ||||| ||||| Sbjct 15536 TGCTTAGGGTCCTTGATGTATGTGTCGATGAGCAAACTGTACATCTCGGAGTGAATGTT 15478 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916192468097573