Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq72 141 1e-27 seq133 87.8 3e-11 >seq72 Length=126438 Score = 141 bits (156), Expect = 1e-27 Identities = 207/290 (71%), Gaps = 2/290 (1%) Strand=Plus/Plus Query 259894 CATGTCGCAGCAGTTGTTCACCTCA-GCGACGCCCACGCTCTTTAATGCCGGCACGCCGC 259952 |||||| ||| ||| || || ||| || |||| || ||||| || || ||||| || | Sbjct 92834 CATGTCCCAGAAGTGCTTTAC-TCATGCCTCGCCAACCCTCTTCAACGCTGGCACTCCTC 92892 Query 259953 GCCCGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCT 260012 || ||| || || ||||| || | ||||||||| | || || || ||||||| Sbjct 92893 AACCCCAGTTGTCATCTTGCTTCTTGATTGACATGAAGTCTGACAGCATTGAAGGCATCT 92952 Query 260013 ATGACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCG 260072 |||| || ||||| || || | ||||||||| | |||||||| || ||| | || Sbjct 92953 ATGATACTCTCAAAACCTGTGCAATGATCTCCAAGACCGCCGGCGGTATTGGTCTCAACG 93012 Query 260073 CACACAAGGTGCGCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGCC 260132 | || | || ||| ||||| |||| | || || ||||||||| || ||||||| Sbjct 93013 CTCATTGCATTCGTGCCACGGGCTCCTATATCGCCGGAACCAACGGCACATCAAACGGCC 93072 Query 260133 TTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182 | | ||||||||| | || || ||| |||| || ||||||||||||||| Sbjct 93073 TCATCCCCATGCTTAGAGTCTTCAACAACACTGCTCGCTACGTCGACCAG 93122 Score = 102 bits (112), Expect = 1e-15 Identities = 281/433 (65%), Gaps = 18/433 (4%) Strand=Plus/Plus Query 261806 GGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTGGCTGGACCTC 261865 || ||||||||| ||| ||||||| ||||||||||| || || | |||||| |||| Sbjct 93141 GGTGCCTTTGCCATTTACTTGGAACCATGGCACGCCGATGTCTTCGAGTGGCTGAACCTG 93200 Query 261866 AAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTTTTACGGCCTG 261925 | |||||| |||||||| || |||| | || || || || || |||| |||| Sbjct 93201 AGAAAGAATCACGGCAA------GGAAGAAGTTCGTGCTCGTGACCTGTTCTACGCCCTG 93254 Query 261926 TGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTCGCTCTTTTGC 261985 ||||| ||| || || |||| || | | || || || ||| | || || ||| Sbjct 93255 TGGACACCCGATCTCTTCATGCAGCGTGTTGAGAAGAACCAGGATTGGACTCTTTTCTGC 93314 Query 261986 CCGTCCGAGGCGCCCGGCCTGCACGAATG-CTATGGCGCGGCCTTTGACGCCCTCTATGA 262044 || |||||| || || || | | ||| |||||| || || || |||||||| || Sbjct 93315 CCCAACGAGGCTCCTGGTCT-CGCTGATGTTTATGGCAAGGAGTTCGAAGCCCTCTACGA 93373 Query 262045 GNNNNNNNNNNNNNNNNNNNNNNCGCGGACCGTC-----GTGCCCGCACGACAGATCTGG 262099 ||||| ||| | || || | || ||||| Sbjct 93374 ----ACAGTATGAGAAAGAAGGCCGCGG-CCGCCAGACTGTCAAAGCCCAGAAGCTCTGG 93428 Query 262100 TCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTACAAGGACGCC 262159 | || ||| ||| ||| || | |||||| || || || || ||| |||||||||| ||| Sbjct 93429 TACGCTATTCTCGAGGCACAGACCGAGACTGGTACCCCTTATATGCTCTACAAGGATGCC 93488 Query 262160 GTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAGGCCAACCTGTGCACC 262219 |||| || |||||||| |||| || || |||| | | |||| || ||||| Sbjct 93489 TGCAACGAGAAGAGCAACCAAAAGAATCTTGGTACCATTAGAAGCTCCAATCTTTGCACT 93548 Query 262220 GAGATCGTCCAGT 262232 ||||| ||| ||| Sbjct 93549 GAGATTGTCGAGT 93561 >seq133 Length=80503 Score = 87.8 bits (96), Expect = 3e-11 Identities = 201/296 (68%), Gaps = 10/296 (3%) Strand=Plus/Plus Query 1456018 AACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAG 1456077 ||||| ||||| || | ||| | || |||||||| ||| |||||||||| | Sbjct 15478 AACATTCACTCCGAGATGTACAGTTTGCTCATCGACACATACATCAAGGACCCTAAGCAA 15537 Query 1456078 AAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGG 1456137 ||| | | || || |||||| ||||| | || | | | || |||||||||||| Sbjct 15538 AAGACCTATCTGTTCGACGCCATTGACACCATTCCCTGCATCCGCAAGAAGGCCGACTGG 15597 Query 1456138 GCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCGTCGGCTTTG 1456197 || |||| |||||| | || || ||| || || | |||| || || | || | Sbjct 15598 GCTTTGAAATGGATCGCAGATGA-TGCTTCGTCA-TTCGGTCAGCGTCTGGTAGCATTCG 15655 Query 1456198 CCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAG---A 1456253 | || || ||||| ||||| ||||| ||| ||| ||||||||| ||| | ||| | Sbjct 15656 CTGCTGTTGAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGTTGAAGGCCA 15715 Query 1456254 AGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGACGA 1456309 || || |||||||| ||| || |||| |||||| || ||| ||| ||||| Sbjct 15716 AG---GGTCTCATGCCTGGT-TTGACCTTTTCCAACGAGTTGATCTCTCGAGACGA 15767 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177762298918134