Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq72 105 6e-18 seq168 91.5 1e-13 >seq72 Length=126438 Score = 105 bits (116), Expect = 6e-18 Identities = 158/224 (71%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 130759 GATTTGAAAATCACCAGCCAGGACGCGTCTAACGTAAATGTTGCTCGTGAACGGTTCAAA 130818 || ||| || || ||||||| ||| || | | ||| ||||| ||| | || || || Sbjct 94169 GACTTGGAACTCTCCAGCCAAGACACGGCGAGAGTAGATGTTTGAGGTGTATGGCTCGAA 94110 Query 130819 GGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATGTATGCCACTAATAG 130878 | | || |||||||||| ||||| | || | ||| || |||||| |||||| | || Sbjct 94109 GCACTCATTGTTGCCGAGGATTTGAGAGGTCGATGCAGTTGGCATGGGTGCCACGAGAAG 94050 Query 130879 AGAATTACGAAGACCGTGCGTCGTGATTTTTCGCTTCAATTCATCCCAATCCCATAGAGA 130938 ||| || |||| |||||| | | ||||| ||| | ||||||||||||| ||| Sbjct 94049 AGAGTTGCGAACACCGTGTTTGGCGATTTCAGCCTTGAGAGCATCCCAATCCCAGAGATC 93990 Query 130939 GGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTT 130982 || || |||| ||||||||| ||| | || || ||||||| Sbjct 93989 TGTGGGGGTGAC---GTTCCACATGTCATACTGAAGAATGCCTT 93949 >seq168 Length=68123 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || || ||||| ||||||||| | | || | ||||| | |||||| ||| Sbjct 27553 GTTGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTTCGACCATCTTCCAACTGTTTGCCG 27612 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || | |||||||| || || || | |||||||||||| ||||||| || Sbjct 27613 GCGAAGATCAATCGCTGTTGGTCAGGTGGAATACCCTCTTTATCTTGGATCTTGGACTTG 27672 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | || | ||||| | | || ||||| | ||| || | ||||| || || || Sbjct 27673 ACATTGTCGATGGTGTCGGATGACTCGACTTCCAAAGTGATTGTCTTGCCTGTGAGGGTC 27732 Query 27231 TTCACAAAGATTTGCATA 27248 || ||||||||||||||| Sbjct 27733 TTGACAAAGATTTGCATA 27750 Score = 82.4 bits (90), Expect = 6e-11 Identities = 150/217 (69%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 27033 CGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTC-GCTCATGTTGCGCTC 27091 |||| || | ||| | || || ||||| || || |||||||| | | ||| || | Sbjct 27763 CGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGAGTT-CGACC 27821 Query 27092 GTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTT 27151 ||||| | ||||||||||||| | || | |||||||| || || || | ||||||||| Sbjct 27822 ATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGAATACCCTCTTT 27881 Query 27152 ATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTAT 27211 ||| ||||||| || | | || | || || | | || || || || || || Sbjct 27882 ATCTTGGATCTTGGACTTAACATTGTCAATGGTATCGCTAGACTCCACCTCGAGGGTGAT 27941 Query 27212 AGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || || || ||||| || || |||||||||||| Sbjct 27942 GGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCATA 27978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424931774303784