Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq168 176 5e-39 seq70 141 1e-28 seq8 102 9e-17 seq133 100 3e-16 seq4 91.5 2e-13 >seq168 Length=68123 Score = 176 bits (194), Expect = 5e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || ||||| ||||| || || || ||||| ||||| | Sbjct 27977 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAGTCTAGC 27918 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| ||| | ||| | || || || || || ||||| |||||||| ||||| Sbjct 27917 GATACCATTGACAATGTTAAGTCCAAGATCCAAGATAAAGAGGGTATTCCTCCTGACCAA 27858 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || ||||| || | || |||| ||| || ||| ||||||| || Sbjct 27857 CAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGAACTCTATCAGACTACAAC 27798 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||||||||||||||| ||| |||| || || ||||| Sbjct 27797 ATCCAGAAAGAATCCACTCTTCATCTTGTCCTGCGCCTCCGTGGTGG 27751 Score = 141 bits (156), Expect = 1e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || ||||| || || || ||||||||||||||||| || || || ||| Sbjct 27521 ATGCAGATTTTCGTCAAAACCCTAACTGGCAAGACTATTACTCTAGAAGTCGAATCATCC 27462 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | ||| | ||| | || || || |||||||||||||| || || || ||| Sbjct 27461 GACACGATCGACAATGTCAAGTCAAAGATCCAAGACAAGGAGGGAATCCCACCCGATCAG 27402 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || ||||| || |||||| | ||||||| ||| || || | ||||| || Sbjct 27401 CAGCGATTGATCTTTGCAGGCAAGCAATTGGAGGATGGTCGAACTCTCTCCGACTACAAC 27342 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACAA 27636 |||||||||| ||| || ||| | || ||| | || || ||||| ||| Sbjct 27341 ATCCAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACTGCGTGGTGGTCAA 27291 Score = 136 bits (150), Expect = 5e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 27430 ACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCT 27489 ||||| ||||| || || |||||||| ||||| | || | |||| || | ||| | Sbjct 28181 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCCAGCGACACTATTGACAACGTCAAGTCC 28122 Query 27490 AAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAG 27549 || || ||||| ||||| || |||||||| || ||||| || || || |||||||| ||| Sbjct 28121 AAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAACGCCTTATCTTTGCTGGCAAG 28062 Query 27550 CAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCAT 27609 ||||| || || | ||||||||| || || || ||||||||||||| || | ||| Sbjct 28061 CAACTTGAAGACGGCCGTACCCTAAGCGATTACAACATCCAAAAGGAATCTACCTTGCAT 28002 Query 27610 CTAGTCTTGCGTCTTCGCGGTGG 27632 || ||| | ||||| || ||||| Sbjct 28001 CTTGTCCTTCGTCTCCGTGGTGG 27979 Score = 125 bits (138), Expect = 8e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||||||||| || || |||||||| || ||| | || || |||||| Sbjct 27749 ATGCAAATCTTTGTCAAGACCCTCACAGGCAAGACAATCACTTTGGAAGTCGAGTCATCC 27690 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | ||| | || || || || || ||||| ||||| || ||||| Sbjct 27689 GACACCATCGACAATGTCAAGTCCAAGATCCAAGATAAAGAGGGTATTCCACCTGACCAA 27630 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | || || || || || || | || |||| ||| || || | ||||| || Sbjct 27629 CAGCGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGTCGAACTCTCTCCGACTACAAC 27570 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || ||||| || ||||||||||| || | | || || ||||| Sbjct 27569 ATTCAGAAGGAGTCAACTCTTCATCTCGTGCTTAGACTACGAGGTGG 27523 >seq70 Length=128403 Score = 141 bits (156), Expect = 1e-28 Identities = 148/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||| || | ||| |||||||| || || |||||||| || || |||||||| ||||| Sbjct 69543 AATTCACAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTC 69602 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | ||| | ||| | || ||||| |||||||| ||||||||||||||||| Sbjct 69603 CGACACCATCGACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCAGACCA 69662 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATA 27583 |||||| | || ||||| || |||||||| || |||| || ||||| ||| || || | Sbjct 69663 GCAGCGATTGATCTTTGCCGGAAAGCAACTTGAAGATGGCCGCACCCTCAGC-GATTACA 69721 Query 27584 ATGTCCAAAAGG 27595 | ||||||||| Sbjct 69722 ACATCCAAAAGG 69733 >seq8 Length=306822 Score = 102 bits (112), Expect = 9e-17 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 27499 GACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAG 27558 |||||||| || || || || |||||||| ||||| || || || || |||||||||||| Sbjct 208610 GACAAGGAAGGCATCCCACCTGACCAGCAACGTCTGATCTTCGCCGGCAAGCAACTCGAG 208551 Query 27559 GATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTG 27618 || | || ||||| | ||||| || |||| ||||| || || || ||| | ||| | Sbjct 208550 GACGGCCGAACCCTGTCTGACTACAACATCCAGAAGGAGTCGACCCTGCATTTGGTCCTT 208491 Query 27619 CGTCTTCGCGGTGG 27632 |||||||| ||||| Sbjct 208490 CGTCTTCGTGGTGG 208477 >seq133 Length=80503 Score = 100 bits (110), Expect = 3e-16 Identities = 302/459 (66%), Gaps = 12/459 (3%) Strand=Plus/Plus Query 64702 TCGTCGTTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGG 64761 ||||| || ||||||||||| | ||| || || ||| || || || ||||| ||||| Sbjct 15625 TCGTCATTCGGTCAGCGTCTGGTAGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGC 15684 Query 64762 TCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCG 64821 |||||| | || |||||| | || ||| || ||||| ||| || | ||||| Sbjct 15685 TCATTCGCCGCCATCTTCTGGTTGAAGGCCAAGGGTCTCATGCCTGGTTTGACCTTTTCC 15744 Query 64822 AACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGC--GGTTACCCTGTTCA 64879 |||||| |||||||||| |||||||| | ||| || ||||| | ||| |||| Sbjct 15745 AACGAGTTGATCTCTCGAGACGAGGGCATGCACACCGACTTTGCCTGCTTA-TTACTTCA 15803 Query 64880 GCCACCTCAAGGACAAACC--ATCACATGGGACTATAATTGATATAGTAAAATCGGCTGT 64937 |||||||| |||| || | | || | | || | || | | | ||| || Sbjct 15804 -ACACCTCAACCACAAGCCAGACCCCAAGCTCATCGAA--GCCATCATCACAGAGGCCGT 15860 Query 64938 AGAAATTGAAAAGGAATTCATTACTGCCGCGCTTCCGTGTCGTCTCATCGGCATGGATGC 64997 | || || || |||||| | || | || ||||| ||| || | |||||| | || Sbjct 15861 TGCCATCGAGAAAGAATTCTTGACCGATGCTCTTCCCTGTGCCCTTCTTGGCATGAACGC 15920 Query 64998 CGATAAGATGAAACAGTATATCGAATTTGTAGCAGATCGCCTGCT--TACTCAGTTTGGT 65055 | | |||| ||||||||||||| || || || || || || || | || | || Sbjct 15921 CAAGCTGATGCAACAGTATATCGAGTTCGTCGCCGACCGTCTTCTCCTGGCCA--TGGGA 15978 Query 65056 ATTAAGCCCTACTGGAATTCTTCAAATCCATTTGACTGGATGGAGACGATCAGCCTGGAG 65115 | |||| | || || | | || || || || ||||||| ||| ||| | Sbjct 15979 AACAAGCGCGTCTACAACGCAACCAACCCCTTCAGCTTCATGGAGAACATCTCCCTTGCT 16038 Query 65116 GGGAAGACTAACTTTTTTGAAAAGAGGGTAGGTGATTAC 65154 || ||||| ||||| || || ||| | || ||||| ||| Sbjct 16039 GGCAAGACCAACTTCTTCGAGAAGCGAGTGGGTGACTAC 16077 >seq4 Length=360590 Score = 91.5 bits (100), Expect = 2e-13 Identities = 222/327 (68%), Gaps = 7/327 (2%) Strand=Plus/Plus Query 31218 CGACGCCAACTGGGCCGGTACCC-ACAAGTCGCACGAGTGCACGCTTATTATTACCGAGG 31276 |||||||||| |||||| |||| | ||| | ||| |||| || || || |||| || | Sbjct 22604 CGACGCCAACAAGGCCGGAACCCGAGAAGGC-CACAAGTGTACCCTAATCCTTACTGAAG 22662 Query 31277 GTGACTCGGC-AAAGGCGCTTGCTATTGCTGGCTTGAGTGTTGTGGGGCGCAATGCGTTC 31335 |||| || || |||||| ||||| || || || ||||| || | || ||| Sbjct 22663 GTGATTCAGCCAAAGGC-CTTGCCATGGCAGGTCGTTCCGTTGTTGGTCCGGATTTGTTT 22721 Query 31336 GGGGTGTTTCCGCTCCGAGGCAAGCCGCGTAACGTTCGTGACGCCTCCGTTAAACAGGTT 31395 ||||| || ||||| || || ||| || || |||||||||||||| || | || | Sbjct 22722 GGGGTTTTCCCGCTTCGTGGAAAGTTGCTCAATGTTCGTGACGCCTCTGTCGATCAAATC 22781 Query 31396 ACGGATAATGAAGAGTTTTCCAACCTGAAAAAGATCCTCGGGCTTCAGCATGGCAAGGTA 31455 | | |||| |||| || ||| | || || |||| || || || || ||||| Sbjct 22782 TCCAAGAATGCAGAGATTCAGAACATCAAGAATTTCCTTGGTCTCCAACACAAGAAGGTC 22841 Query 31456 TATA-ATTCACTGAGAGAATTGCGGTACGGTCGCCTCATGATTATGACCGACGCAGATCT 31514 || | ||| | || | || ||||||| | ||||| ||||| ||| |||| Sbjct 22842 TACACCGACACACA-AGGCCTTCGTTACGGTCATTTGATGATCATGACTGACCAGGATCA 22900 Query 31515 CGACGGCAGTCACATCAAGGGTCTTGT 31541 ||| || ||||| ||||| ||| |||| Sbjct 22901 CGATGGAAGTCATATCAAAGGT-TTGT 22926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570306785657840