Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq168 111 1e-19 >seq168 Length=68123 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| ||||| || ||||| || ||||| || |||||| | || |||||| || Sbjct 27521 ATGCAGATTTTCGTCAAAACCCTAACTGGCAAGACTATTACTCTAGAAGTCGAATCATCC 27462 Query 27850 GAC--GATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 ||| ||| ||||| ||||| ||| || ||||| || || | || || | Sbjct 27461 GACACGATCGACAAT--GTCAAGTCAAAGATCCAAGACAAGGAGGGAATCCCACCCGATC 27404 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 |||| || || || ||||| || || |||||||| || | || | | ||||| |||| Sbjct 27403 AGCAGCGATTGATCTTTGCAGGCAAGCAATTGGAGGATGGTCGAACTCTCTCCGACTACA 27344 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 |||||||||| |||||||| |||||||||| ||| | ||||||| || Sbjct 27343 ACATCCAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACTGCGTGGTGG 27295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355860201103989