Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq168 154 3e-32 seq70 134 3e-26 seq72 132 1e-25 seq8 93.3 1e-13 >seq168 Length=68123 Score = 154 bits (170), Expect = 3e-32 Identities = 164/215 (76%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| ||||||||||| ||||| |||||||| || || | || || | |||||| Sbjct 27766 AGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGAGTTCGACCATCT 27825 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||| || || |||||||| | || |||||||||||||||| || || || || Sbjct 27826 TCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGAATACCCTCTTTATCT 27885 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079 |||||||| || || || || ||||| || ||| || |||||||| ||||| Sbjct 27886 TGGATCTTGGACTTAACATTGTCAATGGTATCGCTAGA---CTCCACCTCGAGGGTGATG 27942 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||||||||| || || | ||||| Sbjct 27943 GTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977 Score = 147 bits (162), Expect = 5e-30 Identities = 165/221 (75%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 || ||||| || || || |||||||| ||||| || || ||||| || || | || || Sbjct 27529 CGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTT 27588 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013 | |||||||||| ||| ||||| |||||||| | || ||||||||||| |||| || Sbjct 27589 CGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGAATACCC 27648 Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073 || || || |||||||| || || || ||||||||||| || || || || | | Sbjct 27649 TCTTTATCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGATGACTCGACTTCCAAA 27708 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| ||||| | ||||| Sbjct 27709 GTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749 Score = 136 bits (150), Expect = 9e-27 Identities = 143/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || | || || || ||||||||||| ||||| ||||| | || ||| Sbjct 27994 AGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTACGGCCGTCT 28053 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || |||||||| || |||||||||||||| || || ||||||| |||||||| ||| Sbjct 28054 TCAAGTTGCTTGCCAGCAAAGATAAGGCGTTGCTGATCCGGAGGAATGCCTTCCTTATCC 28113 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || || ||||| | || ||||| || ||||| ||| Sbjct 28114 TGGATCTTGGACTTGACGTTGTCAATAGTGTCGCTGGACTCCACCTCAAGGGTGATGGTC 28173 Query 211083 TTTCCCGT 211090 ||||| || Sbjct 28174 TTTCCGGT 28181 Score = 122 bits (134), Expect = 2e-22 Identities = 160/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 ||| ||||| | || | || || ||| ||| ||||||||||| || || | || || Sbjct 27300 ACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGAGT 27359 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| |||| ||||||||||| ||||| | || || || || || || | ||| Sbjct 27360 TCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGATCGGGTGGGATTCC 27419 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 |||||||| ||||||||| || || || ||||| ||||| || ||| || || || Sbjct 27420 CTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGATGATTCGACTTCTAG 27479 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || ||||| || || || || || || || | |||||| Sbjct 27480 AGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 >seq70 Length=128403 Score = 134 bits (148), Expect = 3e-26 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986 ||||||||||| ||||| ||||| | |||||||| || ||||| || || ||||| Sbjct 69731 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAGATC 69672 Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 | || || ||||| ||||||| |||||||||||| || ||||| || || || ||| Sbjct 69671 AATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 69612 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105 |||||||| || || ||||| || ||||| ||||| |||||||| ||||| || || Sbjct 69611 ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 69553 >seq72 Length=126438 Score = 132 bits (146), Expect = 1e-25 Identities = 202/282 (72%), Gaps = 8/282 (3%) Strand=Plus/Minus Query 178088 CCAAAGTTCTTTTGGTTGCTCTT-TC--TGCAAATGGCATCTTTGTAC-GCAATGAAGGG 178143 |||| ||||||||||||||||| || |||| |||||| ||||| ||| ||||| Sbjct 93520 CCAAGATTCTTTTGGTTGCTCTTCTCGTTGCA---GGCATCCTTGTAGAGCATATAAGGG 93464 Query 178144 CATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGT 178203 | || ||| | || ||| ||||||| | ||| |||| ||||||| |||||| Sbjct 93463 G-TACCAGTCTCGGTCTGTGCCTCGAGAATAGCGTACCAGAGCTTCTGGGCTTTGACAGT 93405 Query 178204 CTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATA 178263 || | | ||||| ||||| |||| || |||||| | ||||| ||| ||||| Sbjct 93404 CTGGCGGCCGCGGCCTTCTTTCTCATACTGTTCGTAGAGGGCTTCGAACTCCTTGCCATA 93345 Query 178264 GACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTT 178323 |||||| ||||||| |||||||| ||||||||||| ||| |||| | || | || Sbjct 93344 AACATCAGCGAGACCAGGAGCCTCGTTGGGGCAGAAAAGAGTCCAATCCTGGTTCTTCTC 93285 Query 178324 CACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 || || | ||||||||| || | ||||| | ||| ||||| Sbjct 93284 AACACGCTGCATGAAGAGATCGGGTGTCCACAGGGCGTAGAA 93243 >seq8 Length=306822 Score = 93.3 bits (102), Expect = 1e-13 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | || || || ||||| || |||||||| || || | ||||| Sbjct 208482 ACGAAGACGAAGGACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 208541 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || || |||||||| |||||||| || ||||| |||||||| || | || Sbjct 208542 TCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGTGGGATGCC 208601 Query 211013 TTCCTTGTC 211021 ||||||||| Sbjct 208602 TTCCTTGTC 208610 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159144470221055