Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18]
507 sequences; 30,376,333 total letters
Query= NC_029692.1
Length=362276
Score E
Sequences producing significant alignments: (Bits) Value
seq168 154 3e-32
seq70 134 3e-26
seq72 132 1e-25
seq8 93.3 1e-13
>seq168
Length=68123
Score = 154 bits (170), Expect = 3e-32
Identities = 164/215 (76%), Gaps = 6/215 (3%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| ||||||||||| ||||| |||||||| || || | || || | ||||||
Sbjct 27766 AGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGAGTTCGACCATCT 27825
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|||| ||| || || |||||||| | || |||||||||||||||| || || || ||
Sbjct 27826 TCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGAATACCCTCTTTATCT 27885
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTC---AGAGCTTTCAACCTCGAGAGTGATC 211079
|||||||| || || || || ||||| || ||| || |||||||| |||||
Sbjct 27886 TGGATCTTGGACTTAACATTGTCAATGGTATCGCTAGA---CTCCACCTCGAGGGTGATG 27942
Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
|||||||| ||||||||||| || || | |||||
Sbjct 27943 GTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977
Score = 147 bits (162), Expect = 5e-30
Identities = 165/221 (75%), Gaps = 0/221 (0%)
Strand=Plus/Plus
Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953
|| ||||| || || || |||||||| ||||| || || ||||| || || | || ||
Sbjct 27529 CGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTT 27588
Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCT 211013
| |||||||||| ||| ||||| |||||||| | || ||||||||||| |||| ||
Sbjct 27589 CGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGAATACCC 27648
Query 211014 TCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGA 211073
|| || || |||||||| || || || ||||||||||| || || || || | |
Sbjct 27649 TCTTTATCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGATGACTCGACTTCCAAA 27708
Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||||| ||||| || ||||| ||||| ||||| | |||||
Sbjct 27709 GTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749
Score = 136 bits (150), Expect = 9e-27
Identities = 143/188 (76%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962
|||||||| || | || || || ||||||||||| ||||| ||||| | || |||
Sbjct 27994 AGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTACGGCCGTCT 28053
Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022
|| || |||||||| || |||||||||||||| || || ||||||| |||||||| |||
Sbjct 28054 TCAAGTTGCTTGCCAGCAAAGATAAGGCGTTGCTGATCCGGAGGAATGCCTTCCTTATCC 28113
Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082
|||||||| || ||||| || || ||||| | || ||||| || ||||| |||
Sbjct 28114 TGGATCTTGGACTTGACGTTGTCAATAGTGTCGCTGGACTCCACCTCAAGGGTGATGGTC 28173
Query 211083 TTTCCCGT 211090
||||| ||
Sbjct 28174 TTTCCGGT 28181
Score = 122 bits (134), Expect = 2e-22
Identities = 160/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
||| ||||| | || | || || ||| ||| ||||||||||| || || | || ||
Sbjct 27300 ACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGAGT 27359
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| ||||| |||| ||||||||||| ||||| | || || || || || || | |||
Sbjct 27360 TCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGATCGGGTGGGATTCC 27419
Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072
|||||||| ||||||||| || || || ||||| ||||| || ||| || || ||
Sbjct 27420 CTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGATGATTCGACTTCTAG 27479
Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114
||| || ||||| || || || || || || || | ||||||
Sbjct 27480 AGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521
>seq70
Length=128403
Score = 134 bits (148), Expect = 3e-26
Identities = 137/179 (77%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 210927 TTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATA 210986
||||||||||| ||||| ||||| | |||||||| || ||||| || || |||||
Sbjct 69731 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAGATC 69672
Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046
| || || ||||| ||||||| |||||||||||| || ||||| || || || |||
Sbjct 69671 AATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 69612
Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAA 211105
|||||||| || || ||||| || ||||| ||||| |||||||| ||||| || ||
Sbjct 69611 ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 69553
>seq72
Length=126438
Score = 132 bits (146), Expect = 1e-25
Identities = 202/282 (72%), Gaps = 8/282 (3%)
Strand=Plus/Minus
Query 178088 CCAAAGTTCTTTTGGTTGCTCTT-TC--TGCAAATGGCATCTTTGTAC-GCAATGAAGGG 178143
|||| ||||||||||||||||| || |||| |||||| ||||| ||| |||||
Sbjct 93520 CCAAGATTCTTTTGGTTGCTCTTCTCGTTGCA---GGCATCCTTGTAGAGCATATAAGGG 93464
Query 178144 CATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGT 178203
| || ||| | || ||| ||||||| | ||| |||| ||||||| ||||||
Sbjct 93463 G-TACCAGTCTCGGTCTGTGCCTCGAGAATAGCGTACCAGAGCTTCTGGGCTTTGACAGT 93405
Query 178204 CTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATA 178263
|| | | ||||| ||||| |||| || |||||| | ||||| ||| |||||
Sbjct 93404 CTGGCGGCCGCGGCCTTCTTTCTCATACTGTTCGTAGAGGGCTTCGAACTCCTTGCCATA 93345
Query 178264 GACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTT 178323
|||||| ||||||| |||||||| ||||||||||| ||| |||| | || | ||
Sbjct 93344 AACATCAGCGAGACCAGGAGCCTCGTTGGGGCAGAAAAGAGTCCAATCCTGGTTCTTCTC 93285
Query 178324 CACTCGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365
|| || | ||||||||| || | ||||| | ||| |||||
Sbjct 93284 AACACGCTGCATGAAGAGATCGGGTGTCCACAGGGCGTAGAA 93243
>seq8
Length=306822
Score = 93.3 bits (102), Expect = 1e-13
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Plus
Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952
|||||| | ||||| | || || || ||||| || |||||||| || || | |||||
Sbjct 208482 ACGAAGACGAAGGACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGACAGGGT 208541
Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012
| || || || || |||||||| |||||||| || ||||| |||||||| || | ||
Sbjct 208542 TCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGTGGGATGCC 208601
Query 211013 TTCCTTGTC 211021
|||||||||
Sbjct 208602 TTCCTTGTC 208610
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1159144470221055
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |