Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18]
507 sequences; 30,376,333 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq168 111 1e-19
seq70 102 6e-17
>seq168
Length=68123
Score = 111 bits (122), Expect = 1e-19
Identities = 163/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| |||||||| || || || || || ||||| ||||| || || |
Sbjct 27521 ATGCAGATTTTCGTCAAAACCCTAACTGGCAAGACTATTACTCTAGAAGTCGAATCATCC 27462
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | ||| || ||||| || || | || || |||||
Sbjct 27461 GACACGATCGACAATGTCAAGTC-AAAGATCCAAGACAAGGAGGGAATCCCACCCGATCA 27403
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || ||||| ||||| ||| |||| || | || ||| | ||| |||||
Sbjct 27402 GCAGCGATTGATCTTTGCAGGCAAGCAATTGGAGGATGGTCGAACTCTCTCCGACTACAA 27343
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| ||| ||| | ||||| || || || |||| || ||
Sbjct 27342 CATCCAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACTGCGTGGTGG 27295
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| || || || || |||||||| || || || |||||| | ||||| || || |
Sbjct 27749 ATGCAAATCTTTGTCAAGACCCTCACAGGCAAGACAATCACTTTGGAAGTCGAGTCATCC 27690
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || | || | | || ||||| ||| | || || || ||
Sbjct 27689 GACACCATCGACAATGTCAAGTCCAAGA-TCCAAGATAAAGAGGGTATTCCACCTGACCA 27631
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| || || || ||||||||||| ||||||| | || ||| | ||| |||||
Sbjct 27630 ACAGCGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGTCGAACTCTCTCCGACTACAA 27571
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||| ||
Sbjct 27570 CATTCAGAAGGAGTCAAC 27553
Score = 86.0 bits (94), Expect = 4e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Minus
Query 23635 ACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTAAAACAA 23694
|| ||||| || ||||| || || || || |||| |||||| |||| | | ||
Sbjct 28181 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCCAGCGACACTATTGACAACGTCAAGTCC 28122
Query 23695 AAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAA 23754
|| || || || ||||| | || || ||||| || || | || ||||| |||||
Sbjct 28121 AAGATCCAGGATAAGGAAGGCATTCCTCCGGATCAGCAACGCCTTATCTTTGCTGGCAAG 28062
Query 23755 CAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACAT 23814
||||| ||||||| || || || ||||||||||||| ||||| || || || || |||
Sbjct 28061 CAACTTGAAGACGGCCGTACCCTAAGCGATTACAACATCCAAAAGGAATCTACCTTGCAT 28002
>seq70
Length=128403
Score = 102 bits (112), Expect = 6e-17
Identities = 132/180 (73%), Gaps = 2/180 (1%)
Strand=Plus/Plus
Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679
||||| || ||||||||||| || || ||||| || || || || || | ||||| |
Sbjct 69553 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACCATC 69612
Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738
|| ||| | || | || | || ||||| ||||| | || ||||| || ||||| ||
Sbjct 69613 GACAATGTCAAGTCCAAGA-TTCAAGACAAGGAAGGAATTCCTCCAGACCAGCAGCGATT 69671
Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798
|| |||||||| || ||||| ||||| | ||||| | ||||||||||||| |||||
Sbjct 69672 GATCTTTGCCGGAAAGCAACTTGAAGATGGCCGCACCCTCAGCGATTACAACATCCAAAA 69731
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 338007511417556
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |