Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq168 143 6e-29 seq383 127 5e-24 seq70 120 7e-22 >seq168 Length=68123 Score = 143 bits (158), Expect = 6e-29 Identities = 165/222 (74%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||||||||| || |||||||||||||| |||| ||||| || | | ||| Sbjct 27756 ACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGATAGAGT 27815 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| | ||| || || |||||||| | ||| |||||||| || |||||||| Sbjct 27816 TCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGAATACC 27875 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 || || ||||||||||| ||| ||| || ||||| || | ||||| || | Sbjct 27876 CTCTTTATCTTGGATCTTGGACTTAACATTGTCAATGGTATCGCTAGACTCCACCTCGAG 27935 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| ||||| || || | ||| || | ||| | |||||| Sbjct 27936 GGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || ||||| || || || || ||||| || || || || | ||||| |||| | |||| Sbjct 27529 CGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGAGAGAGTT 27588 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | |||||||| | ||| || || |||||||| | ||| |||||||| || |||||||| Sbjct 27589 CGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGAATACCC 27648 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 || || ||||||||||| ||| ||| ||||||||||| || | || || || || Sbjct 27649 TCTTTATCTTGGATCTTGGACTTGACATTGTCGATGGTGTCGGATGACTCGACTTCCAAA 27708 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | || | |||||| Sbjct 27709 GTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749 Score = 125 bits (138), Expect = 2e-23 Identities = 161/222 (73%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| ||||||| || | || || ||| || ||||||| ||||| |||| | ||| Sbjct 27300 ACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGAGT 27359 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || ||||| || | ||||| || || ||||| | ||| || || ||||| || || || Sbjct 27360 TCGACCATCCTCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGATCGGGTGGGATTCC 27419 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| ||| ||| ||||| ||||| || | ||| || |||| Sbjct 27420 CTCCTTGTCTTGGATCTTTGACTTGACATTGTCGATCGTGTCGGATGATTCGACTTCTAG 27479 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||||||| || | ||||| | ||| | ||||| Sbjct 27480 AGTAATAGTCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 >seq383 Length=4932 Score = 127 bits (140), Expect = 5e-24 Identities = 194/274 (71%), Gaps = 3/274 (1%) Strand=Plus/Plus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 ||| |||||||||||||||| | ||||| || | || || ||||||| | | Sbjct 3746 AACATTATATTTAATATTTGCAGTATTTTCAGGACTAGCTGGGACGGCATTTTCTGTTCT 3805 Query 7500 TATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTA 7559 |||||| ||||||||| ||| || ||| ||| ||| || | ||| ||||| || Sbjct 3806 TATAAGATTAGAATTATCTGGACCTGGTGTACAA-TATATAGCAG--ATAATCAACTATA 3862 Query 7560 CAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTAT 7619 || ||| || || || ||||| | || ||||| || || | || ||||| | | | Sbjct 3863 TAATAGTATAATAACAGCACATGCTATAGTAATGATATTTTTCATGGTAATGCCTGCTTT 3922 Query 7620 GATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTT 7679 ||||| || || ||||||| || | |||||| | | || | |||||||||||| || Sbjct 3923 AATAGGAGGGTTTGGAAATTTTTTATTACCTTTATTAGTAGGAGGTCCTGATATGGCATT 3982 Query 7680 TCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 || || | || ||||||||||||||||||||| Sbjct 3983 CCCTAGATTAAATAATATAAGTTTTTGATTACTA 4016 Score = 86.0 bits (94), Expect = 1e-11 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| || |||||||||||||| | ||||| || | |||||||| || || |||| Sbjct 4427 TTCAGGGTGTCCAAAAAATCAGAAAAGGTGTTGGTATAATATAGGATCTCCACCACCTGC 4368 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | |||||||| ||||| ||||||||||| |||||||| Sbjct 4367 TACTTCAAAAAATGATGTATTGAAATTTCTATCTGTTAAAAC 4326 >seq70 Length=128403 Score = 120 bits (132), Expect = 7e-22 Identities = 125/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 ||||||| ||||||||| | || | |||||||| || ||||| || || ||||| Sbjct 69731 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAGATC 69672 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 | ||| || ||||| || ||||| |||||||||||||| ||||| ||| ||| ||| Sbjct 69671 AATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCTTGAATCTTGGACTTGACATTGTCG 69612 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 |||||||| || | ||||| || | ||||| ||||||||||| Sbjct 69611 ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGT 69568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192523453391858