Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq168 152 1e-31 seq70 147 5e-30 seq8 84.2 5e-11 >seq168 Length=68123 Score = 152 bits (168), Expect = 1e-31 Identities = 160/209 (77%), Gaps = 6/209 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 ||||| ||||| || |||||||| ||||| || ||||||||||||||||| ||| Sbjct 27974 CAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAGGTGGAGTCTAGC--- 27918 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 || ||||| || || || || ||||| || || ||||| || || ||||| ||||| Sbjct 27917 GATACCATTGACAATGTTAAGTCCAAGATCCAAGATAAAGAGGGTATTCCTCCTGACCAA 27858 Query 178041 CAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAAC 178100 || ||| | ||||||||||| |||||| | |||||||| | ||||| | || || ||| Sbjct 27857 CAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGAACTCTATCAGACTACAAC 27798 Query 178101 GTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| |||||||| || || |||||||| Sbjct 27797 ATCCAGAAAGAATCCACTCTTCATCTTGT 27769 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || |||||||| || || ||||| | || || || || ||| Sbjct 27746 CAAATCTTTGTCAAGACCCTCACAGGCAAGACAATCACTTTGGAAGTCGAGTCATCCGAC 27687 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| || || ||||| || || || || ||||| || Sbjct 27686 ACCATCGACAATGTCAAGTCCAAGATCCAAGATAAAGAGGGTATTCCACCTGACCAACAG 27627 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||||||||| |||||| | |||||||| | ||||| |||| || ||| | Sbjct 27626 CGATTGATCTTCGCCGGCAAACAGTTGGAAGATGGTCGAACTCTCTCCGACTACAACATT 27567 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACT 178138 || || || ||||| || ||||| || | ||||| Sbjct 27566 CAGAAGGAGTCAACTCTTCATCTCGTGCTTAGACT 27532 >seq70 Length=128403 Score = 147 bits (162), Expect = 5e-30 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || ||||| || || || |||||||| |||||||| || ||||||||| Sbjct 69553 TTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACCATC 69612 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| |||||||| ||||| |||||||| ||||| |||||||| ||| | Sbjct 69613 GACAATGTCAAGTCCAAGATTCAAGACAAGGAAGGAATTCCTCCAGACCAGCAGCGATTG 69672 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 ||||| |||||||| || || |||||||| | || || |||||| ||| ||||||| Sbjct 69673 ATCTTTGCCGGAAAGCAACTTGAAGATGGCCGCACCCTCAGCGATTACAACATCCAAAA 69731 >seq8 Length=306822 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/111 (77%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073 ||||| ||||| ||||| || ||||||||||| || ||||||||||| || || ||||| Sbjct 208610 GACAAGGAAGGCATCCCACCTGACCAGCAACGTCTGATCTTCGCCGGCAAGCAACTCGAG 208551 Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCAT 178124 || || | || || | || || ||| |||| || || || || |||||| Sbjct 208550 GACGGCCGAACCCTGTCTGACTACAACATCCAGAAGGAGTCGACCCTGCAT 208500 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203723380637358