Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000785215.1_202014-11-18] 507 sequences; 30,376,333 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq168 105 6e-18 seq8 105 6e-18 seq70 86.0 6e-12 >seq168 Length=68123 Score = 105 bits (116), Expect = 6e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| |||||| ||||||||||| || ||||| ||||||||||| || || | || Sbjct 27310 AACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAGAGAGTTCGACCATCC 27369 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || | |||||||| || || |||| ||||| || || | || | | ||||||||| Sbjct 27370 TCCAATTGCTTGCCTGCAAAGATCAATCGCTGCTGATCGGGTGGGATTCCCTCCTTGTCT 27429 Query 41771 ATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 ||| ||| ||| || | || | |||||| || || || || | || || | Sbjct 27430 TGGATCTTTGACTTGACATTGTCG--ATCGTGTCGGATGATTCGACTTCTAGAGTAATAG 27487 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | || || || || || || |||||||||||||| Sbjct 27488 TCTTGCCAGTTAGGGTTTTGACGAAAATCTGCAT 27521 Score = 105 bits (116), Expect = 6e-18 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || ||||| | | ||| ||||| || || ||||||||||||||| ||||||||| Sbjct 27523 CCACCTCGTAGTCTAAGCACGAGATGAAGAGTTGACTCCTTCTGAATGTTGTAGTCGGAG 27582 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || | ||| ||||||||||| |||| ||||||||||| | ||| Sbjct 27583 AGAGTTCGACCATCTTCCAACTGTTTGCCGGCGAAGATCAATCGCTGTTGGTCAGGTGGA 27642 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | ||| || || ||| || ||| || | || | |||||| ||||| | Sbjct 27643 ATACCCTCTTTATCTTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGGATGACTCGA 27700 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 | |||| || || || || || || || ||||| || || || ||||| Sbjct 27701 CTTCCAAAGTGATTGTCTTGCCTGTGAGGGTCTTGACAAAGATTTGCAT 27749 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | || ||||| || ||| || ||||| ||||| ||||| || Sbjct 27751 CCACCACGGAGGCGCAGGACAAGATGAAGAGTGGATTCTTTCTGGATGTTGTAGTCTGAT 27810 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || | ||| || |||||||| |||| ||||||||||| | ||| Sbjct 27811 AGAGTTCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCAGGAGGA 27870 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||| || || ||| || ||| ||| | | | || ||||| |||||||| Sbjct 27871 ATACCCTCTTTATCTTGGATCTTGGACTT-AACATTGTCAATGGTATCGCTAGACTCCAC 27929 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| ||||| || ||||| Sbjct 27930 CTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 27977 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/206 (70%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||||| || ||||| || ||||| || ||| Sbjct 27979 CCACCACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTT 28038 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || || |||||||| || || || ||||| || || |||| ||| Sbjct 28039 AGGGTACGGCCGTCTTCAAGTTGCTTGCCAGCAAAGATAAGGCGTTGCTGATCCGGAGGA 28098 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACAC-AGTGTCGCTCGACTCCAC 41814 | || ||||| ||| ||| || ||| | || | || ||||||||| |||||||| Sbjct 28099 ATGCCTTCCTTATCCTGGATCTTGGACTTGA-CGTTGTCAATAGTGTCGCTGGACTCCAC 28157 Query 41815 CTCCACCGTTATCGTTTTACCCGTCA 41840 ||| | || || || || || |||| Sbjct 28158 CTCAAGGGTGATGGTCTTTCCGGTCA 28183 >seq8 Length=306822 Score = 105 bits (116), Expect = 6e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 41634 CGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGG 41693 |||| || || ||||| | |||| |||||| || ||||||||| ||||| ||||| | Sbjct 208475 CGCCACCACGAAGACGAAGGACCAAATGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 208534 Query 41694 AGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGG 41753 | ||||| || |||| ||||| |||||||||||||| ||||| || || ||||| | | Sbjct 208535 ACAGGGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGTG 208594 Query 41754 GAACGCTCTCCTTGTC 41769 | | || |||||||| Sbjct 208595 GGATGCCTTCCTTGTC 208610 >seq70 Length=128403 Score = 86.0 bits (94), Expect = 6e-12 Identities = 132/184 (72%), Gaps = 6/184 (3%) Strand=Plus/Minus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 |||| || ||||| || ||| ||||||||| | || || || ||||| ||||| || | Sbjct 69733 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCAAGTTGCTTTCCGGCAAAGA 69674 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTG-CTT--CAACG 41789 ||| ||||| ||||| | |||| | |||||||| ||| | || | ||| || | Sbjct 69673 TCAATCGCTGCTGGTCTGGAGGAATTCCTTCCTTGTCT-TGAATCTTGGACTTGACATTG 69615 Query 41790 ACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 ||| |||||| |||||||||||| | || || || || ||||| || ||||| | Sbjct 69614 TCGATG--GTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGA 69557 Query 41850 CGAA 41853 |||| Sbjct 69556 CGAA 69553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301070148400