Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 seq2 127 2e-24 seq1 107 2e-18 >seq3 Length=5104443 Score = 127 bits (140), Expect = 2e-24 Identities = 292/428 (68%), Gaps = 14/428 (3%) Strand=Plus/Minus Query 116946 TGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCT 117005 |||| ||||||| || || || || ||| || |||||||||| ||||| || | Sbjct 4691935 TGTTCGACGCCATTGACACCATTCCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAAT 4691876 Query 117006 GGATCGCCGGCAGA-GAGGC--CGCC-TTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTC 117061 ||||||| ||| || || || | || || |||| |||||||| ||||| || || Sbjct 4691875 GGATCGC----AGATGATGCTTCGTCGTTTGGTCAGCGTCTGGTGGCATTCGCTGCTGTT 4691820 Query 117062 GAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTC 117121 ||||| ||||||| || ||| ||||||||||| || ||| | ||| || || Sbjct 4691819 GAGGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGTTGAAGGCCAAGGGACTT 4691760 Query 117122 ATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGAC 117181 ||||| || |||| ||| ||||||| | ||||| | |||||||| |||| |||| Sbjct 4691759 ATGCCTGGTTTGACCTTCTCCAACGAGTTGATCTCTCGAGACGAGGGCATGCACACCGAC 4691700 Query 117182 TTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAG-CGCGGCGCGCGTCAGGGA 117240 |||||||| || | | |||| | || | | | || | | || | || | Sbjct 4691699 TTTGCCTGCTTATTACTTCAGCACCTTAACCA-CAAGCCAGACCCCAAGCTCATCGAAGC 4691641 Query 117241 GATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCGC-TGCCGGTGC 117299 ||| |||| || || || ||||||||| | ||| | ||||| || | | || |||| Sbjct 4691640 CATCATCACTGAGGCCGTTGCCATCGAGAAAGAATTCTTGACCGATGCTCTTCCCTGTGC 4691581 Query 117300 GTCTGCTGGGACTCAATTGCGAAAC-GATGTCGCAATACATCGAGTTCGTCGCCGACAGG 117358 ||| || || | || || || | |||| || || |||||||||||||||||| | Sbjct 4691580 -TCTTCTTGGCATGAA-CGCCAAGCTGATGCAACAGTATATCGAGTTCGTCGCCGACCGT 4691523 Query 117359 CTGCTGCT 117366 ||||| || Sbjct 4691522 CTGCTCCT 4691515 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/222 (69%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 116638 GTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTC 116697 |||| ||||||||| ||||| || || |||||||| | || ||||| ||||| || Sbjct 4692385 GTGGAACATGTACAAGCGAGCCGAAGCTTCTTTCTGGACTGCAGAAGAGGTCGACCTCTC 4692326 Query 116698 CAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 ||| || ||||||| | ||| ||||||| | ||| | |||||||| || Sbjct 4692325 CAAAGATCTTCACGACTGGCACAACCGCCTGAACGATGATGAGAGATATTTCATCTCCCA 4692266 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 || ||||| || ||||| ||| || || || || ||||| || ||| ||||| | || Sbjct 4692265 TGTTCTGGCTTTCTTCGCTGCCTCTGATGGGATTGTGAACGAAAACCTGATCGAGAGATT 4692206 Query 116815 CGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGG 116856 | || || || | | ||||| || ||||||||||| Sbjct 4692205 CAGCGGTGAAGTTCAAATCCCAGAGGCTCGTTGCTTCTACGG 4692164 >seq2 Length=5498963 Score = 127 bits (140), Expect = 2e-24 Identities = 158/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| ||||| || || ||||| || || || | || |||||| | || Sbjct 3944689 ATGCAGATCTTCGTCAAAACCCTGACTGGCAAGACTATTACTCTAGAAGTCGAATCGTCC 3944748 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| ||| || | ||||||||||| ||||| | || || Sbjct 3944749 GACACCATCGACAACG-TCAAGTCAAAGATCCAAGACAAAGAGGGTATCCCACCTGATCA 3944807 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| ||| | |||| || |||||||| |||| || | || || || ||||||||| Sbjct 3944808 GCAGCGATTGATCTTTGCAGGCAAACAATTGGAAGATGGTCGAACTCTTTCCGACTACAA 3944867 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTG 40902 |||||| |||||| ||| |||||| | |||||| Sbjct 3944868 CATCCAAAAGGAGAGCACCCTGCATTTGGTGTTG 3944901 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| || || ||||||||| |||| || || | | | Sbjct 3944233 ATGCAAATCTTCGTCAAGACTCTCACCGGAAAGACCATCACCCTCGAAGTGGAGTCTAGC 3944292 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | ||| ||||||| || || || ||||| || | || || Sbjct 3944293 GATACCATTGACAACGTT-AAGTCCAAAATTCAGGATAAGGAAGGCATTCCTCCTGATCA 3944351 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||||| ||| || || || || || |||| |||||||| | |||||||| Sbjct 3944352 ACAGCGTCTCATCTTCGCTGGAAAGCAACTTGAAGACGGTCGCACCCTGAGTGACTACAA 3944411 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||||||| |||| || ||||| || Sbjct 3944412 CATCCAGAAGGAATCCACTCTCCATCTCGT 3944441 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| ||||| || || ||||| ||||| || ||||| | || ||||| | || Sbjct 3944461 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACAATCACTCTAGAAGTCGAGTCATCC 3944520 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | ||||| ||| || | || |||||||| || || | ||||| Sbjct 3944521 GACACCATCGACAATGTCAAGTCAAAGATCCAAGATAAAGAGGGTATTCCTCCAGACCAA 3944580 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || ||| | |||| ||| || |||||| |||| || | || || || ||||||||| Sbjct 3944581 CAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGGACTCTGTCAGACTACAAC 3944640 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 || ||||||||| | || || ||||| ||| Sbjct 3944641 ATTCAGAAGGAGTCTACTCTTCATCTCGTG 3944670 Score = 86.0 bits (94), Expect = 6e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 40714 ACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCAAACGCTCAAGGAA 40773 || || || ||||||||| | || || || ||| ||||| | | | | ||||| Sbjct 3944029 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCCAGCGACACCATTGACAATGTCAAGTCC 3944088 Query 40774 AAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAA 40833 || || | || || || ||||| || | || |||||||| || |||| ||| || || Sbjct 3944089 AAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAGCAACGCCTTATCTTCGCTGGAAAG 3944148 Query 40834 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCAT 40893 || || || || | |||||||| | ||| ||||||||||| ||||| | || ||||| Sbjct 3944149 CAACTCGAGGATGGCCGCACCCTAAGCGATTACAACATCCAAAAGGAATCTACCTTGCAT 3944208 Query 40894 CTAGT 40898 || || Sbjct 3944209 CTTGT 3944213 >seq1 Length=6137194 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 40686 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGC 40745 || ||| || | ||||| || || ||||||||||| ||||||||| | || || || | Sbjct 5194939 AAGAATTCACAGCTTCGTCAAGACCCTCACGGGCAAGACCATCACCCTTGAGGTGGAGTC 5194880 Query 40746 CACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | | ||||| || || | ||||| || || || || |||| Sbjct 5194879 GTCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGAATTCCTCCGGA 5194820 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| ||| | |||| || || || ||||| || || | |||||||||| ||| || Sbjct 5194819 CCAGCAGCGATTGATCTTTGCCGGAAAGCAGCTCGAAGATGGCCGCACCCTCAGCGATTA 5194760 Query 40866 CAACATCCAGAAGG 40879 ||||||||| |||| Sbjct 5194759 CAACATCCAAAAGG 5194746 Score = 104 bits (114), Expect = 2e-17 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 40778 TTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGC 40837 |||| ||||| ||||||||||| | ||||||||||| || |||| ||| ||||| || | Sbjct 441014 TTCTAGACAAGGAGGGCATCCCACCTGACCAGCAACGTCTGATCTTCGCCGGCAAGCAAC 441073 Query 40838 TGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 | || |||| || ||||| ||||||||||||||||||||| | || ||||| Sbjct 441074 TCGAGGACGGCCGAACCCTGTCTGACTACAACATCCAGAAGGAGTCGACCCTGCA 441128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515219142037840