Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq6 370 9e-98 seq2 120 3e-22 seq3 86.0 6e-12 >seq6 Length=3112757 Score = 370 bits (410), Expect = 9e-98 Identities = 1207/1854 (65%), Gaps = 44/1854 (2%) Strand=Plus/Plus Query 22145 GTGCGAAGATAATACATGCCCGTCTTCAGACCCATCTTCCACGCGTAAAAATGTATCGAC 22204 ||||| ||||| |||||||| ||||| |||||||||||||| | |||||| || || Sbjct 984916 GTGCGGAGATAGTACATGCCAGTCTTGAGACCCATCTTCCAGCCAGCAAAATGCATGGAT 984975 Query 22205 GTCAATTTT--CCATAACTCGGCAAGTCCATGTACACATTGAACGACTGACTCTGATCGA 22262 || ||| || |||| | ||| | | | | || || || || |||||| | Sbjct 984976 GT-AATCTTGCCCATGG-TGGGCTCTTTAAGATGGATGTTCAATGATTGCGACTGATCAA 985033 Query 22263 TAAACGCTCCTCGATCGGCGGCCATATTTATCAATGTACGCATCGACATTTCCCATACGG 22322 | || || ||||| ||||| ||||| | | | ||| ||| || |||||||| || | Sbjct 985034 TGAAGGCACCTCGGTCGGCCGCCATCTGCAGGACTGTGCGCTGGGAGATTTCCCAGACAG 985093 Query 22323 TCTTGTACAGTTGCCTGATCTCTAACGGTATCGATTCGATCCTCTGGACGGACCCGTTAT 22382 ||||||| ||| | ||| || || || ||| | || ||||| || | Sbjct 985094 TCTTGTAGAGTGCCTTGAGATCGGCGGGAATGTTGGGGATATTTTGAACGGAGCCACCTT 985153 Query 22383 TGTGTATGATCAAATTTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGA 22442 | ||||| || || || | || ||| | |||| | || | || || | Sbjct 985154 CGGCAATGATACGGTTCTTCATGTTGTCCGACCAAAGTCCGAGGTCGACGAGGTCCTTCA 985213 Query 22443 CCAG--ATGACGGTTCACCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTT 22500 || ||| |||| || ||||| ||||| || | |||||| ||||| ||| ||||| Sbjct 985214 GAAGCCATG--GGTTGACGACTTGGAACTCACCAGCCAAGACACGGCGAGAGTAGATGTT 985271 Query 22501 GGATGTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGG 22560 ||| ||| | || ||||| | |||||||| || || ||||||| |||||| || || || Sbjct 985272 GGAGGTGTATGGCTCGAAGCACTCATTGTTGCCAAGGATCTGAGAGGTCGATGCAGTTGG 985331 Query 22561 CATCGGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAG--C 22618 ||| || || | || || ||||| | | |||||||| | |||| | |||||| | Sbjct 985332 CATGGGTGCAACGAGAAGAGAGTTGCGAACACCGTGCTTGGCGATTTCAGCCTTGAGAGC 985391 Query 22619 ATCGACCAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACG 22678 ||| ||| ||||| ||||| | || || || || |||||| || || || | | | Sbjct 985392 ATC--CCAATCCCAGAGATCTGTGGGGGTGACGTT---CCACATGTCATACTGAAGAATG 985446 Query 22679 CC----GCGACTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCG-GCAA 22733 || | |||| |||||||||| || | ||| ||||| | | || | || | Sbjct 985447 CCTTGGGAGACT----GGGCTGCCTTGATAGCTAGAGTAAGGACCCTCT-TCTTGAGCCA 985501 Query 22734 GTTCGCAGCTCGCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATT 22793 ||| |||| || | || | | || || ||||| ||||| | |||| | | Sbjct 985502 GTTGGCAGGATGCAGTAAGAGCAGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGCT 985561 Query 22794 CGGCG-GCGGCGACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCC 22852 |||| || || ||| | || | ||||| | ||| || ||||| | ||| Sbjct 985562 -GGCGTGCTTCGGGAGAGTCGAAAGGTAGACGCAGAGCAAGGAAGGCATCCGCGAGACCT 985620 Query 22853 TGAACGCCTATACCGATCGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGA 22912 |||||||| | || | || |||| | | || || ||| || | || Sbjct 985621 TGAACGCCCAAGCCAACGGGGCGGTGTCTGTAGTTGCTGTTTTGTGCTTCAATGACGGGG 985680 Query 22913 TACCAATTCGAATCGATTGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNN 22972 || | || || || | |||||||||| | |||||||| | | Sbjct 985681 TAGTAGTTGACGTCAATGATCTTGTTCAAGTTGCGGGTCACAACCTGAACGACTTCGTGC 985740 Query 22973 NNNNNNTCAAAGTCGTAAACGCCC---GATTGTACAACAAACTTGTTGACGGCGATCGAG 23029 |||||||||| ||||| | ||| ||||||| || | |||| ||| Sbjct 985741 AGACGACCAAAGTCGTATTCGCCCCGAGCTTGGTCAACAAAGGTGGGCAGAGCGAGGGAG 985800 Query 23030 GCAAGATTGCATACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGA 23089 ||||||||||| ||||| ||||| || | || ||||| ||||| ||||| || ||| Sbjct 985801 GCAAGATTGCAGACGGCAACCTCATCGGGAGCAGTATACTCGACAATCTCGGTGCAAAGA 985860 Query 23090 TTGCTACACTTTATCGTGCCCAAATTGCTCTGGTTGCTTTT-TCGATTGCACGAATCCTT 23148 ||| | | || || || | ||| |||||||||| || ||| ||||| | |||||| Sbjct 985861 TTGGAGCTTCTGATGGTACCAAGATTCTTCTGGTTGCTCTTCTCG-TTGCAGGCATCCTT 985919 Query 23149 GTAGAGCATGTACGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGT 23208 ||| ||||| || || || || |||||| ||| | ||||| || || ||| | | Sbjct 985920 GTACAGCATATAAGGGGTACCGGTCTCGGTCTGTGCCTCGAGAATGGCGTACCAGAGCTT 985979 Query 23209 CTGAGCGTGAACACGTCGCACGTAC-CTGCCTTCTTCCTCGTACTTTTGGTACAACGCGT 23267 ||| || | ||| ||| || | | |||||||| |||||||| || ||| | || | Sbjct 985980 CTGGGCTTTGACA-GTCTGGCGACCGCGGCCTTCTTTCTCGTACTGTTCGTAAAGGGCTT 986038 Query 23268 CAAATTCGGCACCGTAACAGTCGGCCAGGCCGGGCGATTGCATCGGACACATGAGACTCC 23327 | || || || ||| || || || || || | | | || || | || ||| Sbjct 986039 CGAACTCCTTGCCATAAACATCAGCGAGACCAGGAGCCTCGTTGGGGCAGAAAAGGGTCC 986098 Query 23328 ACAT--TGAGTCATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAA 23385 | || || || || ||||| || ||| || ||||| ||| |||| || |||||||| Sbjct 986099 A-ATCCTGGTTC-TTCTCAACACGCTGCATGAAGAGATCGGGTGTCCACAGGGCGTAGAA 986156 Query 23386 CAGTTCGCGGGCGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAA 23445 ||| || || || || || || || ||||| ||||||| ||| | || | || || Sbjct 986157 CAGGTCACGAGCACGAACTTCTTCCTTGCCATGGTTCTTTCTCAGGTTCAGCCACTCGAA 986216 Query 23446 CACGTCCGCATGCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCC 23505 || || || ||||| ||||| | ||||| |||||| || || || | ||| ||||| || Sbjct 986217 GACATCGGCGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCGGGCCGCTTGTTGCCTCC 986276 Query 23506 CTGATCGACGTAACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGA 23565 ||| |||||||| || || ||||||||| | ||||| ||||| || | ||| ||||| || Sbjct 986277 CTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGGGGATGAGGCCGTTTGA 986336 Query 23566 CGCGCCGCCTACGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACC 23625 | |||| || || | | || || | || |||| | ||| ||| || ||| Sbjct 986337 TGTGCCGTTGGTTCCGGCGATATAGGAGCCAGTGGCACGAATGCAATGAGCGTTGAGACC 986396 Query 23626 TATGCCTCCGCCCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTC 23685 || || ||| | | || || ||||| || || || ||||| || |||||||| || Sbjct 986397 AATACCGCCGGCGGTCTTGGAGATCATTGCACAGGTCTTGAGAGTATCATAGATGCCTTC 986456 Query 23686 GATGCTGTCCTCTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGC 23745 |||||||| || | | | |||||| || || |||| || | || || || | Sbjct 986457 AATGCTGTCGGACTTCATGTCAATCAAGAAGCAGGATGACAACTGGGGTTGAGGAGTGCC 986516 Query 23746 GGCCGAGAACAGTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGT 23805 || ||| || || || ||| || || ||| | | ||||| || ||||| || Sbjct 986517 AGCGTTGAAAAGGGTTGGCGAGGCATGAGTGAAGCACTTCTGGGACATGAGGTTGTATGT 986576 Query 23806 GTCGATGGCGGCATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTA 23865 || ||||| || | ||| | ||||| || || | ||| || ||||| | | | Sbjct 986577 CTCAATGGCCTTCTCGACGTCATTGCCGTGAATGCCCACGGCCACACGCATGAGAAGATG 986636 Query 23866 TTGAGGTCTCT---CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGT 23922 ||| ||||||| | || || ||| ||| |||| ||| || || | | || || Sbjct 986637 TTGTGGTCTCTCTGCAACTTTGTTGCC---AATCTTGAGCAGGTAGGATCTCTCCAAAGT 986693 Query 23923 TTTAAATCCAAAATAGTCATAGTTAAAGTCACGATCGTGCACTATGGCCGAATT 23976 || || ||||| || | ||||| |||||||| |||| || |||||||| || Sbjct 986694 CTTGAAACCAAAGTATTGGTAGTTGAAGTCACGGTCGTAGACAATGGCCGAGTT 986747 >seq2 Length=5498963 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || |||||||| || ||||| | || || || | ||| Sbjct 3944461 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACAATCACTCTAGAAGTCGAGTCATCC 3944520 Query 31253 GACAGTGTCGAAACGGTCAAA-CAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| |||| | ||||| || ||| | || || || || | || || ||||| Sbjct 3944521 GACACCATCGACAATGTCAAGTCAAAGA-TCCAAGATAAAGAGGGTATTCCTCCAGACCA 3944579 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||||| | || ||||| || |||||||||||||| | |||| || || || || Sbjct 3944580 ACAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGGACTCTGTCAGACTACAA 3944639 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 |||||| || || || ||||||||||| || || |||||| | || |||| Sbjct 3944640 CATTCAGAAGGAGTCTACTCTTCATCTCGTGCTCAGACTGCGAGGTGGTA 3944689 >seq3 Length=5104443 Score = 86.0 bits (94), Expect = 6e-12 Identities = 152/221 (69%), Gaps = 3/221 (1%) Strand=Plus/Minus Query 57573 TGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCT 57632 |||||||||||||| || ||||| || || ||||| | ||||| || ||||| || Sbjct 4692384 TGGAACATGTACAAGCGAGCCGAAGCTTCTTTCTGGACTGCAGAAGAGGTCGACCTCTCC 4692325 Query 57633 AAGGATCTGAGCGATTGG---GATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACAC 57689 || ||||| ||| ||| | ||| || || ||||||| |||| || || Sbjct 4692324 AAAGATCTTCACGACTGGCACAACCGCCTGAACGATGATGAGAGATATTTCATCTCCCAT 4692265 Query 57690 GTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTT 57749 || |||| || ||||| || || ||||| ||||| ||||| || || |||| ||||| Sbjct 4692264 GTTCTGGCTTTCTTCGCTGCCTCTGATGGGATTGTGAACGAAAACCTGATCGAGAGATTC 4692205 Query 57750 TCACAAGAAGTGCAAGTGACGGAGGCGAGATGCTTTTACGG 57790 ||||| ||| | | ||||| | ||||| ||||| Sbjct 4692204 AGCGGTGAAGTTCAAATCCCAGAGGCTCGTTGCTTCTACGG 4692164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445766349851280