Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq6 223 4e-53 seq3 93.3 5e-14 >seq6 Length=3112757 Score = 223 bits (246), Expect = 4e-53 Identities = 634/965 (66%), Gaps = 12/965 (1%) Strand=Plus/Plus Query 62949 GATGCCAGATTACACACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAA 63008 || || ||||| || ||||| ||||||| | | | | ||| | | ||||| |||||| Sbjct 985798 GAGGCAAGATTGCAGACGGCAACCTCATCGGGAGCAGTATACTCGACAATCTCGGTGCAA 985857 Query 63009 AGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 63068 ||||| | |||| || || | ||| | || || ||||| | ||| || |||||| Sbjct 985858 AGATTGGAGCTTCTGATGGTACCAAGATTCTTCTGGTTGCTCTTCTCGTTGCAGGCATCC 985917 Query 63069 TTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 63128 || || || || | || ||||| || || |||| | || | ||| || | ||||| | Sbjct 985918 TTGTACAGCATATAAGGGGTACCGGTCTCGGTCTGTGCCTCGAGAATGGCGTACCAGA-G 985976 Query 63129 ACTCGAGCCTTTATTATAGATTTGT-ATCTC--CTTTCTCTTTCGTATAGAGTATACAAT 63185 || | |||| | || | | | | | | |||| | ||||| | || | Sbjct 985977 CTTCTGGGCTTTG--ACAGTCTGGCGACCGCGGCCTTCTTTCTCGTACTGTTCGTAAAGG 986034 Query 63186 CGTTCGAACTCGTCTCCCCAAACATTGTCCAATCTAGGACATTCATCCGGACACATCAAC 63245 ||||||||| | || |||||| | | | |||| || | || || | | Sbjct 986035 GCTTCGAACTCCTTGCCATAAACATCAGCGAGACCAGGAGCCTCGTTGGGGCAGAAAAGG 986094 Query 63246 GACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATA 63305 | ||| || || | || || || | ||| |||||||| || |||| || || Sbjct 986095 GTCCAATCCTGGTTCTTCTCAACACGCTGCATGAAGAGATCGGGTGTCCACAGGGCGTAG 986154 Query 63306 AATAGATCTCTTGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCC 63365 || || || | | | | ||| || || || |||||| | || | || || | Sbjct 986155 AACAGGTCACGAGCACGAACTTCTTCCTTGCCATGGTTCTTTCTCAGGTTCAGCCACTCG 986214 Query 63366 ATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCT 63425 | | ||| | ||||| || |||||||| ||||| | | || ||||| ||||| ||| Sbjct 986215 AAGACATCGGCGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCGGGCCGCTTGTTGCCT 986274 Query 63426 CCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTT 63485 ||||| || | ||| | ||| ||||| || | ||||| | ||| || || | |||||| Sbjct 986275 CCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGGGGATGAGGCCGTTT 986334 Query 63486 GATATACCATTGGTACCGGAGATATAGCCTCCACTGGCACGAATATTACTAATTGAT-AG 63544 ||| | || ||||| |||| ||||||| ||| |||||||||| | | | | | || Sbjct 986335 GATGTGCCGTTGGTTCCGGCGATATAGGAGCCAGTGGCACGAATGCAA-TGAGCGTTGAG 986393 Query 63545 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCC 63604 ||| || || || || | || ||||| | ||| || || | || ||||||||||| Sbjct 986394 ACCAATACCGCCGGCGGTCTTGGAGATCATTGCACAGGTCTTGAGAGTATCATAGATGCC 986453 Query 63605 TTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGT 63664 ||| ||||| || |||||| || | || ||| |||| ||| | ||| ||| Sbjct 986454 TTCAATGCTGTCGGACTTCATGTCAATCAAGAAGCAGGATGACAACTGGGGTTGAGGAGT 986513 Query 63665 TCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTA 63724 || || || || | ||| || || || || || || || || | || | || ||||| Sbjct 986514 GCCAGCGTTGAAAAGGGTTGGCGAGGCATGAGTGAAGCACTTCTGGGACATGAGGTTGTA 986573 Query 63725 CGTCTCAATAGCTGAGTCTATATCCCATTG--ATGAATTCCTACTGCGACACGCATTAAC 63782 |||||||| || ||| | ||||| ||||| || || || |||||||| | Sbjct 986574 TGTCTCAATGGC--CTTCTCGACGTCATTGCCGTGAATGCCCACGGCCACACGCATGAGA 986631 Query 63783 ATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAA 63842 | || || ||||| || ||| ||||||| || || | || ||||||| | |||||| Sbjct 986632 AGATGTTGTGGTCTCTCTGCAACTTTGTTGCCAATCTTGAGCAGGTAGGATCTCTCCAAA 986691 Query 63843 GTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGC 63902 || || |||||||| || | ||| ||||| || ||||| | ||| |||| |||||| Sbjct 986692 GTCTTGAAACCAAAGTATTGGTAGTTGAAGTCACGGTCGTAGACAATGGCCGAGTTGAGC 986751 Query 63903 TTATC 63907 | ||| Sbjct 986752 TCATC 986756 >seq3 Length=5104443 Score = 93.3 bits (102), Expect = 5e-14 Identities = 216/322 (67%), Gaps = 13/322 (4%) Strand=Plus/Plus Query 33579 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTG 33638 || || || || ||| ||||| |||||||||| | || || ||||| || || || Sbjct 4691689 AAGCAGGCAAAGTCGGTGTGCATGCCCTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTC 4691748 Query 33639 AGTCCGGGCATTAGGCCACGCTTT---TTAAGCCAAAATATGGAAGCGAATGATCCGGAA 33695 | || ||||| || || ||| || | ||| || |||| |||||||| || || Sbjct 4691749 AAACCAGGCATAAGTCC---CTTGGCCTTCAACCAGAAGATGGCGGCGAATGAGCCAGAG 4691805 Query 33696 AAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG--T 33753 |||||||| || || || ||||| || || | || | || ||| | || || | | Sbjct 4691806 AAGAAGATACCCTCAACAGCAGCGAATGCCACCAGACGCTGACCAAA--CGACGAAGCAT 4691863 Query 33754 CATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33810 ||| | ||||| || |||||| ||||||||||| | || || || || || | Sbjct 4691864 CATCTGCGATCCATTTCAAAGCCCAGTCGGCCTTCTTGCGGATGCAGGGAATGGTGTCAA 4691923 Query 33811 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33870 |||| | || || ||| | |||| ||| || || | || || ||||| | | || Sbjct 4691924 TGGCGTCGAACAGGTAGGTCTTTTGCTTAGGGTCCTTGATGTATGTGTCGATGAGCAAAC 4691983 Query 33871 TATACATTTCCGAATGAATGTT 33892 | ||||| || || |||||||| Sbjct 4691984 TGTACATCTCGGAGTGAATGTT 4692005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817529145520