Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq6 205 1e-47 seq3 93.3 6e-14 >seq6 Length=3112757 Score = 205 bits (226), Expect = 1e-47 Identities = 764/1182 (65%), Gaps = 18/1182 (2%) Strand=Plus/Plus Query 79615 GCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCA 79674 |||| || || ||||| || ||||| ||||||| | | | | ||| | | || || Sbjct 985792 GCGAGGGAGGCAAGATTGCAGACGGCAACCTCATCGGGAGCAGTATACTCGACAATCTCG 985851 Query 79675 GTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACAC 79734 ||||| || || | | ||||| || | ||| | || || ||||| | ||| || Sbjct 985852 GTGCAAAGATTGGAGCTTCTGATGGTACCAAGATTCTTCTGGTTGCTCTTCTCGTTGCAG 985911 Query 79735 GCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTC 79794 |||||||| || || || | || ||||| || || |||| | || | ||| || | | Sbjct 985912 GCATCCTTGTACAGCATATAAGGGGTACCGGTCTCGGTCTGTGCCTCGAGAATGGCGTAC 985971 Query 79795 CAGACGACTCGAGCCTTTATTATAGACTTGT-ATCTCTT--TTCTCTTTCGTATTGTGTA 79851 |||| | || | |||| | || || | | | | |||| | ||||| ||| Sbjct 985972 CAGA-GCTTCTGGGCTTTG--ACAGTCTGGCGACCGCGGCCTTCTTTCTCGTACTGTTCG 986028 Query 79852 TATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACAC 79911 || | ||||||||| | || ||||||| | | |||||| |||| || || Sbjct 986029 TAAAGGGCTTCGAACTCCTTGCCATAAACATCAGCGAGACCAGGAGCCTCGTTGGGGCAG 986088 Query 79912 ATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGA 79971 | | | ||| || | | || || || | ||| |||||||| || |||| || Sbjct 986089 AAAAGGGTCCAATCCTGGTTCTTCTCAACACGCTGCATGAAGAGATCGGGTGTCCACAGG 986148 Query 79972 GCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGG 80031 || || || || | | | | || || || || |||||| | || | || Sbjct 986149 GCGTAGAACAGGTCACGAGCACGAACTTCTTCCTTGCCATGGTTCTTTCTCAGGTTCAGC 986208 Query 80032 AACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTG 80091 || | | | ||| | ||||| || |||||||| ||||| | | || || || ||| Sbjct 986209 CACTCGAAGACATCGGCGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCGGGCCGCTTG 986268 Query 80092 TTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATA 80151 || |||||||| || | ||| | ||| ||||| || | ||||| | ||| || || | Sbjct 986269 TTGCCTCCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGGGGATGAGG 986328 Query 80152 CCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATT 80211 || || ||||| || ||||| |||| ||||||| ||| |||||||||| | | | Sbjct 986329 CCGTTTGATGTGCCGTTGGTTCCGGCGATATAGGAGCCAGTGGCACGAATGCAA-TGAGC 986387 Query 80212 GAT-AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATA 80270 | | ||||| || || || || | || ||||| | ||| || || | |||||||| Sbjct 986388 GTTGAGACCAATACCGCCGGCGGTCTTGGAGATCATTGCACAGGTCTTGAGAGTATCATA 986447 Query 80271 GATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACG 80330 |||||| || ||||| || |||||| || | || ||| |||| ||| | | Sbjct 986448 GATGCCTTCAATGCTGTCGGACTTCATGTCAATCAAGAAGCAGGATGACAACTGGGGTTG 986507 Query 80331 ACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAG 80390 | ||| || || || || | ||| || || || || || || || || | |||| || Sbjct 986508 AGGAGTGCCAGCGTTGAAAAGGGTTGGCGAGGCATGAGTGAAGCACTTCTGGGACATGAG 986567 Query 80391 ATTGTACGTCTCAATAGCTGATTCTATATCCCATTG--ATGAATTCCTACCGCGACACGC 80448 ||||| |||||||| || |||| | ||||| ||||| || || || |||||| Sbjct 986568 GTTGTATGTCTCAATGGC--CTTCTCGACGTCATTGCCGTGAATGCCCACGGCCACACGC 986625 Query 80449 ATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTT 80508 || | | || || ||||| || | | ||||| || || | || ||| ||| | Sbjct 986626 ATGAGAAGATGTTGTGGTCTCTCTGCAACTTTGTTGCCAATCTTGAGCAGGTAGGATCTC 986685 Query 80509 TCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAG 80568 |||||||| || |||||||| || | ||| ||||| || ||||| | ||| ||||| Sbjct 986686 TCCAAAGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCACGGTCGTAGACAATGGCCGAG 986745 Query 80569 TTGAGTTTATCCTTATATTTGTTAACTACATCCATGGTGATAC--TTGAAATAATCGGAG 80626 ||||| | ||| || | | || |||| | | || | | |||| || || || | Sbjct 986746 TTGAGCTCATCGGCATGAGTCATGAC-ACATTCGT-ATGTTTCCTTTGAGATCATGGGGG 986803 Query 80627 AATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATA 80686 | |||| | |||| || || || |||| | | | || || || ||| Sbjct 986804 AGGGTTTTCTGGTTTTGGGGTTGACGTAGTGGTAGAGGTCTGAGATGACCGAGGAGAATT 986863 Query 80687 GtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAAT 80746 |||| || || | ||||| || || ||||| || || | ||| || | |||||||| | Sbjct 986864 GTTTCTTGGTCTGTTTGTGGAGGTTGGATACAGCAATACGGGCTGCGAGGATGGCATAGT 986923 Query 80747 CTGGATGTTGTGTAGTACAAGT-GGCTGCTATTTCGGCTGCC 80787 | ||||| ||| | || || |||||| |||| || ||| Sbjct 986924 CGGGATG-AGTGACGGTCATGTATGCTGCTGTTTCTGCGGCC 986964 >seq3 Length=5104443 Score = 93.3 bits (102), Expect = 6e-14 Identities = 217/322 (67%), Gaps = 13/322 (4%) Strand=Plus/Plus Query 49957 AAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTG 50016 || || || || ||| ||||| |||||||||| | || | |||||||| || || Sbjct 4691689 AAGCAGGCAAAGTCGGTGTGCATGCCCTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTC 4691748 Query 50017 AGTCCGGGCATTAGGCCACGCTTT---TTAAGCCAAAATATGGACGCAAATGACCCAGAA 50073 | || ||||| || || ||| || | ||| || |||| || ||||| ||||| Sbjct 4691749 AAACCAGGCATAAGTCC---CTTGGCCTTCAACCAGAAGATGGCGGCGAATGAGCCAGAG 4691805 Query 50074 AAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG--T 50131 |||||||| || || || || || || || || || | || ||| ||| | || | | Sbjct 4691806 AAGAAGATACCCTCAACAGCAGCGAATGCCACCAGACGCTGACCA-AAC-GACGAAGCAT 4691863 Query 50132 CATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 50188 ||| | ||||| || |||||| ||||||||||| | || || || || || | Sbjct 4691864 CATCTGCGATCCATTTCAAAGCCCAGTCGGCCTTCTTGCGGATGCAGGGAATGGTGTCAA 4691923 Query 50189 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 50248 |||| | || || ||| | |||| ||| || || | || || ||||| | | || Sbjct 4691924 TGGCGTCGAACAGGTAGGTCTTTTGCTTAGGGTCCTTGATGTATGTGTCGATGAGCAAAC 4691983 Query 50249 TATACATTTCCGAATGAATGTT 50270 | ||||| || || |||||||| Sbjct 4691984 TGTACATCTCGGAGTGAATGTT 4692005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268719194760