Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq2 140 2e-28 >seq2 Length=5498963 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||||||||| ||||||||||| | |||||||||||||| | ||||| ||||| Sbjct 3944915 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 3944856 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || |||||||||||||| ||||| ||||||||||| ||||| | || Sbjct 3944855 AGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGG 3944796 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||| ||||| || |||| ||||| || | | |||||| | ||||| Sbjct 3944795 ATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGACT 3944736 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || ||||| || || || || ||||| || || || ||||| Sbjct 3944735 TCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || || |||||||| | ||| | ||| | ||| |||||| || | ||||| || ||| Sbjct 3944687 CCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAC 3944628 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || || | || ||||| ||||| ||||| || |||||||||||||| || | || Sbjct 3944627 AGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGA 3944568 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||| ||||| || |||| ||||| || | | |||||| | |||||| Sbjct 3944567 ATACCCTCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACT 3944508 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || || || || || || || || || || || |||||||| Sbjct 3944507 TCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381369558168522