Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq6 224 1e-53 seq3 86.0 8e-12 >seq6 Length=3112757 Score = 224 bits (248), Expect = 1e-53 Identities = 767/1178 (65%), Gaps = 22/1178 (2%) Strand=Plus/Plus Query 71704 GATGCCAGATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAA 71763 || || ||||| || ||||| ||||||| | | | | ||| | | ||| || |||||| Sbjct 985798 GAGGCAAGATTGCAGACGGCAACCTCATCGGGAGCAGTATACTCGACAATCTCGGTGCAA 985857 Query 71764 AGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCC 71823 ||||| | ||||||| || | ||| | || || ||||| | ||| || |||||| Sbjct 985858 AGATTGGAGCTTCTGATGGTACCAAGATTCTTCTGGTTGCTCTTCTCGTTGCAGGCATCC 985917 Query 71824 TTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACG 71883 || || || ||| | || ||||| || || |||| | || | ||| || | ||||| | Sbjct 985918 TTGTACAGCATATAAGGGGTACCGGTCTCGGTCTGTGCCTCGAGAATGGCGTACCAGA-G 985976 Query 71884 ACTCGAGCCTTTATTATATTCTTGT-ATCTCTT--TTCTCTTTCGTATTGTGTATATAAT 71940 || | |||| | | ||| | | | | |||| | ||||| ||| || | Sbjct 985977 CTTCTGGGCTTTG--ACAGTCTGGCGACCGCGGCCTTCTTTCTCGTACTGTTCGTAAAGG 986034 Query 71941 CGTTCGAACTCGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAAT 72000 ||||||||| | || || ||| | | |||||| || || || || | | Sbjct 986035 GCTTCGAACTCCTTGCCATAAACATCAGCGAGACCAGGAGCCTCGTTGGGGCAGAAAAGG 986094 Query 72001 GACCACTC-TCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTAT 72059 | ||| || | || || | || || | ||| |||||||| || |||| || || Sbjct 986095 GTCCAATCCTGGTTCTTC-TCAACACGCTGCATGAAGAGATCGGGTGTCCACAGGGCGTA 986153 Query 72060 AAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGC 72119 || || || | | | | || || || || |||||| | || | || || | Sbjct 986154 GAACAGGTCACGAGCACGAACTTCTTCCTTGCCATGGTTCTTTCTCAGGTTCAGCCACTC 986213 Query 72120 CATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCC 72179 | | ||| | ||||| || |||||||| ||||| | | || ||||| ||||| || Sbjct 986214 GAAGACATCGGCGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCGGGCCGCTTGTTGCC 986273 Query 72180 TCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATT 72239 |||||| || | ||| | ||| ||||| || | ||||| | ||| || || | || || Sbjct 986274 TCCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGGGGATGAGGCCGTT 986333 Query 72240 GGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGAT 72297 |||| || ||||| |||| ||||||| ||| |||||||||| | || |||| Sbjct 986334 TGATGTGCCGTTGGTTCCGGCGATATAGGAGCCAGTGGCACGAATGCAATGAGCGTTGA- 986392 Query 72298 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 72357 |||| || || || || | || ||||| | ||| || || | |||||||||||| Sbjct 986393 -GACCAATACCGCCGGCGGTCTTGGAGATCATTGCACAGGTCTTGAGAGTATCATAGATG 986451 Query 72358 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 72417 || || || || || | |||||| || | || ||| |||| ||| | || | Sbjct 986452 CCTTCAATGCTGTCGGACTTCATGTCAATCAAGAAGCAGGATGACAACTGGGGTTGAGGA 986511 Query 72418 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTG 72477 || || || || || | ||| || || || || || || || || | |||| || ||| Sbjct 986512 GTGCCAGCGTTGAAAAGGGTTGGCGAGGCATGAGTGAAGCACTTCTGGGACATGAGGTTG 986571 Query 72478 TACGTCTCAATAGCTGATTCTATATCCCATTG--ATGTATTCCTACCGCGACACGCATTA 72535 || |||||||| || |||| | ||||| || || || || || |||||||| | Sbjct 986572 TATGTCTCAATGGC--CTTCTCGACGTCATTGCCGTGAATGCCCACGGCCACACGCATGA 986629 Query 72536 ACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCA 72595 | ||| || ||||| || | | ||||| || || | || ||||||| | |||| Sbjct 986630 GAAGATGTTGTGGTCTCTCTGCAACTTTGTTGCCAATCTTGAGCAGGTAGGATCTCTCCA 986689 Query 72596 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGA 72655 |||| || |||||||| || | ||| ||||| || ||||| | ||| |||| |||| Sbjct 986690 AAGTCTTGAAACCAAAGTATTGGTAGTTGAAGTCACGGTCGTAGACAATGGCCGAGTTGA 986749 Query 72656 GTTTATCCTTATATTTGTTAACTATATCCATGGTGATAC--TTGAAATAATCGGAGAATG 72713 | | ||| || | | || | || | | || | | |||| || || || || | Sbjct 986750 GCTCATCGGCATGAGTCATGAC-ACATTCGT-ATGTTTCCTTTGAGATCATGGGGGAGGG 986807 Query 72714 TTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGttt 72773 ||| | |||| || || || |||| | | | || || || ||| |||| Sbjct 986808 TTTTCTGGTTTTGGGGTTGACGTAGTGGTAGAGGTCTGAGATGACCGAGGAGAATTGTTT 986867 Query 72774 ttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGG 72833 || || | ||||| || || ||||| || || | ||| || || |||||||| || || Sbjct 986868 CTTGGTCTGTTTGTGGAGGTTGGATACAGCAATACGGGCTGCGAGGATGGCATAGTCGGG 986927 Query 72834 ATGTTGTGTAGTACAAGT-GGCTGCTATTTCTGCTGCC 72870 ||| ||| | || || |||||| ||||||| ||| Sbjct 986928 ATG-AGTGACGGTCATGTATGCTGCTGTTTCTGCGGCC 986964 >seq3 Length=5104443 Score = 86.0 bits (94), Expect = 8e-12 Identities = 217/324 (67%), Gaps = 17/324 (5%) Strand=Plus/Plus Query 42062 AAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTG 42121 || || || || ||| ||||| ||||| |||| | || || |||||||| || || Sbjct 4691689 AAGCAGGCAAAGTCGGTGTGCATGCCCTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTC 4691748 Query 42122 AGTCCGGGCATTAGGCCACGCTTT---TTAAGCCAAAATATAGACGCAAATGATCCAGAA 42178 | || ||||| || || ||| || | ||| || || | || ||||| ||||| Sbjct 4691749 AAACCAGGCATAAGTCC---CTTGGCCTTCAACCAGAAGATGGCGGCGAATGAGCCAGAG 4691805 Query 42179 AAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAAC--CG--GCACT 42234 |||||||| || || || || || || || | || | || ||| ||| || ||| Sbjct 4691806 AAGAAGATACCCTCAACAGCAGCGAATGCCACCAGACGCTGACCA-AACGACGAAGCA-- 4691862 Query 42235 GTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTC 42291 |||| | ||||| || |||||| ||||||||||| | || || || || || Sbjct 4691863 -TCATCTGCGATCCATTTCAAAGCCCAGTCGGCCTTCTTGCGGATGCAGGGAATGGTGTC 4691921 Query 42292 TATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAG 42351 ||||| | || || ||| | |||| ||| || || | ||||| ||||| | | Sbjct 4691922 AATGGCGTCGAACAGGTAGGTCTTTTGCTTAGGGTCCTTGATGTATGTGTCGATGAGCAA 4691981 Query 42352 ACTATACATTTCTGAATGAATGTT 42375 ||| ||||| || || |||||||| Sbjct 4691982 ACTGTACATCTCGGAGTGAATGTT 4692005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139124496840