Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq2 109 4e-19 >seq2 Length=5498963 Score = 109 bits (120), Expect = 4e-19 Identities = 147/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 15160 ATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTG 15219 ||| || ||||| || || || |||||||| || || || | | ||||||| | ||| Sbjct 3944436 ATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCTTCAAGTTG 3944377 Query 15220 TTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTT 15279 || |||||| | || | ||| ||||| || ||||| ||||| || || |||||| Sbjct 3944376 CTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTT 3944317 Query 15280 GCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGT 15339 | ||| || | || |||||||||||| || || || | ||| ||||| || || || Sbjct 3944316 GGACTTAACGTTGTCAATGGTATCGCTAGACTCCACTTCGAGGGTGATGGTCTTTCCGGT 3944257 Query 15340 CAGAGTTTTTACAAAAATTTGCATA 15364 ||||| || || || ||||||||| Sbjct 3944256 GAGAGTCTTGACGAAGATTTGCATA 3944232 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||| | || ||| || || ||||| |||||| || ||||| |||||||| ||| Sbjct 3944915 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 3944856 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 ||| ||| | ||||| ||||||||||| || | ||||| || || || || ||| Sbjct 3944855 AGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGG 3944796 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || || |||||||| || || ||| || | || ||||| ||| ||| || Sbjct 3944795 ATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGACT 3944736 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 |||| ||||| || || || ||||| ||||| || || || |||||| Sbjct 3944735 TCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCATA 3944688 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362179160273469