Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq2 149 1e-30 >seq2 Length=5498963 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407 || || ||||| | || ||||| ||||| || || |||||| || || | ||||||| Sbjct 3944444 AGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCT 3944385 Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467 || ||||| |||||||| || || || | ||||||||||||||| || ||||| |||||| Sbjct 3944384 TCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCC 3944325 Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527 ||||| || | || || || || | ||||||||||| || || || || || || ||| Sbjct 3944324 TGAATTTTGGACTTAACGTTGTCAATGGTATCGCTAGACTCCACTTCGAGGGTGATGGTC 3944265 Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || || || || || || ||||| Sbjct 3944264 TTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || || || || || ||||| || ||||||| ||| ||||| | |||||| || ||||| Sbjct 3944879 TCCTTTTGGATGTTGTAGTCGGAAAGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAG 3944820 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || | | ||| |||||||| || || || ||||| || || ||||||| || || || Sbjct 3944819 ATCAATCGCTGCTGATCAGGTGGGATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTG 3944760 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | ||| ||| | ||| || ||||| ||||||||||| ||||| || ||||| || Sbjct 3944759 TCGATGGTGTCGGACGATTCGACTTCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACG 3944700 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 3944699 AAGATCTGCAT 3944689 Score = 116 bits (128), Expect = 9e-21 Identities = 139/189 (74%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406 ||| || ||||| || |||||||| || || || || || || ||| || | || || Sbjct 3944217 AAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATC 3944158 Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466 || ||||| |||||||| || || || | || ||||||||||| || ||||| ||||| Sbjct 3944157 CTCGAGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTATC 3944098 Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526 ||| ||||| | || ||||| || | ||| ||||| | || ||||| || || || || Sbjct 3944097 CTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTGGACTCCACCTCAAGGGTGATGGT 3944038 Query 104527 CTTACCAGT 104535 ||| || || Sbjct 3944037 CTTTCCGGT 3944029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151398267229372