Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq2 116 3e-21 >seq2 Length=5498963 Score = 116 bits (128), Expect = 3e-21 Identities = 169/237 (71%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832 ||||| || || | || || ||||||||| |||| || |||||||| | ||| | Sbjct 3944923 TTTACTGACCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGT 3944864 Query 94833 AATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890 | ||| | || ||| || ||| |||| ||||| || ||||||| |||| ||||| Sbjct 3944863 AGTCGG--AAAGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTG 3944806 Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950 ||| || || ||||| |||||||| | || |||| ||||||| | ||| ||||| | Sbjct 3944805 ATCAGGTGGGATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGA 3944746 Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || | || || || || ||||| || ||||| || ||||||||||| Sbjct 3944745 CGATTCGACTTCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 102 bits (112), Expect = 7e-17 Identities = 137/186 (74%), Gaps = 5/186 (3%) Strand=Plus/Minus Query 94801 CAAG-TGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCA 94859 |||| ||||| |||||||||||||| | ||| |||||||| | ||| | |||||| | Sbjct 3944212 CAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATCCTCGA 3944153 Query 94860 GCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAA 94919 | || ||||| | ||||| | | ||||||||| |||||||| ||||| || || | | Sbjct 3944152 GTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGGA 3944093 Query 94920 TTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG--TCGACGTCAATCGTGATGGTTTT 94977 | || | |||||| | | | ||||| || ||| || || |||| |||||||| || Sbjct 3944092 TCTTGGACTTGACATTGTCAATGGTGTC-GC-TGGACTCCACCTCAAGGGTGATGGTCTT 3944035 Query 94978 TCCAGT 94983 ||| || Sbjct 3944034 TCCGGT 3944029 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||| || || | ||| | || | |||||| ||||| || | ||| || || | Sbjct 3944687 CCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTC--TG 3944630 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || || || ||| |||| |||||| ||| | ||||| |||| || || ||||||| Sbjct 3944629 ACAGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAG 3944570 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGA 94958 ||||||| ||||| || | || |||| |||||| | ||| ||||| | |||| Sbjct 3944569 GAATACCCTCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGA 3944510 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | ||||| || || || || || || || || ||||| ||||| Sbjct 3944509 CTTCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448291149567240