Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 143 4e-30 seq2 138 2e-28 >seq5 Length=3543884 Score = 143 bits (158), Expect = 4e-30 Identities = 147/191 (77%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 |||| |||||| || || ||||| || ||||||||||| || ||||||||| |||||||| Sbjct 3261356 AGAT-TCTTCGCGACAATATCCAGGGCATCACCAAGCCTGCCATCCGTCGTTTGGCTCGT 3261414 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 ||||| || ||||||||| |||||| || |||| ||||||| ||| | ||| | || Sbjct 3261415 CGTGGCGGTGTCAAGCGTATCTCTGCCATGATCTACGAAGAGACTCGCGGTGTCCTCAAA 3261474 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 ||||||| | | || |||| ||||||| || ||| || || ||||| || | ||| Sbjct 3261475 TCCTTCCTCGAATCAGTCATCCGTGATGCTGTCACCTACACTGAACACGCAAAGAGAAAG 3261534 Query 16628 ACTGTCACCTC 16638 || ||||| || Sbjct 3261535 ACCGTCACATC 3261545 >seq2 Length=5498963 Score = 138 bits (152), Expect = 2e-28 Identities = 142/183 (78%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| || || | ||| |||||| || |||||||| || ||||||||||| ||||| Sbjct 2228905 GCCAAGCGCCACCGAAAGAT-TCTTCGTGACAACATCCAGGGTATCACCAAGCCTGCTAT 2228963 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 ||| ||||| |||||||||||||| ||||||||| |||| | || |||| ||||||| Sbjct 2228964 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCCGCTATGATCTACGAAGAGAC 2229023 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 || | |||| | |||| ||||||| || || || | ||||||| || || || || Sbjct 2229024 ACGAGGTGTTCTCAAGACCTTCCTCGAGGGTGTCATTCGTGATGCTGTCACATACACTGA 2229083 Query 16612 GCA 16614 ||| Sbjct 2229084 GCA 2229086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075191771237