Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq2 100 2e-16 seq1 89.7 4e-13 >seq2 Length=5498963 Score = 100 bits (110), Expect = 2e-16 Identities = 126/173 (73%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 24015 ACTGGAAAATCGATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAA 24074 || ||||| | || ||| | || || ||| ||| ||||||||| || | ||||| Sbjct 3944029 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCCAGCGACACCATTGACAATGTCAAGTCC 3944088 Query 24075 AAGATTACCGACAAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAG 24134 ||||| || || |||||||| ||||| ||||| || | || || | || || ||| Sbjct 3944089 AAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAGCAACGCCTTATCTTCGCTGGAAAG 3944148 Query 24135 CAACTCGAAGATGACAGAAACGTCAGCGATTATAACATTCAAAAAGAATCTAC 24187 |||||||| |||| | | | | | |||||||| ||||| ||||| |||||||| Sbjct 3944149 CAACTCGAGGATGGCCGCACCCTAAGCGATTACAACATCCAAAAGGAATCTAC 3944201 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | || || || | || || | ||||||||| | | Sbjct 3944461 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACAATCACTCTAGAAGTCGAGTCATCC 3944520 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| || ||||| || || ||||| || ||| Sbjct 3944521 GACACCATCGACAATGTCAAGTCAAAGATCCAAGATAAAGAGGGTATTCCTCCAGACCAA 3944580 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT-GACAGAAAC-GTCAGCGATTATA 24168 ||| || |||| | || ||| || || | |||||| | | || | |||| || || | Sbjct 3944581 CAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGGACTCTGTCA--GACTACA 3944638 Query 24169 ACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||||| || || ||||| ||||| | ||| | ||| || |||| || Sbjct 3944639 ACATTCAGAAGGAGTCTACTCTTCATCTCGTGCTCAGACTGCGAGGTGG 3944687 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | || || ||||| | ||||| || | ||||| | |||||||| | | Sbjct 3944689 ATGCAGATCTTCGTCAAAACCCTGACTGGCAAGACTATTACTCTAGAAGTCGAATCGTCC 3944748 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||||||||| | ||||| |||||| |||||||| || || || || ||||| Sbjct 3944749 GACACCATCGACAACGTCAAGTCAAAGATCCAAGACAAAGAGGGTATCCCACCTGATCAG 3944808 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| || |||| | | ||||| ||| | ||||||| ||| | ||| || ||| Sbjct 3944809 CAGCGATTGATCTTTGCAGGCAAACAATTGGAAGATGGTCGAACTCTTTCCGACTACAAC 3944868 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || ||||| || || | ||||| ||||| ||| || | || || Sbjct 3944869 ATCCAAAAGGAGAGCACCCTGCATTTGGTGTTGAGACTGCGTGGTGG 3944915 >seq1 Length=6137194 Score = 89.7 bits (98), Expect = 4e-13 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 24027 ATTACCATCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 24086 || ||| | || || ||| | |||||||||||| | ||||| ||||| ||| Sbjct 5194899 ATCACCCTTGAGGTGGAGTCGTCCGACACCATCGACAATGTCAAGTCCAAGATCCAAGAC 5194840 Query 24087 AAAGAAGGCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGAT 24146 || ||||| || ||||| || || ||| || |||| | | ||| ||||| ||||||||| Sbjct 5194839 AAGGAAGGAATTCCTCCGGACCAGCAGCGATTGATCTTTGCCGGAAAGCAGCTCGAAGAT 5194780 Query 24147 GACAGAAACGTCAGCGATTATAACATTCAAAA 24178 | | | | | |||||||||| ||||| ||||| Sbjct 5194779 GGCCGCACCCTCAGCGATTACAACATCCAAAA 5194748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935952841395