Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3 143 3e-29 seq6 134 1e-26 seq1 111 1e-19 seq2 105 6e-18 >seq3 Length=5104443 Score = 143 bits (158), Expect = 3e-29 Identities = 353/522 (68%), Gaps = 15/522 (3%) Strand=Plus/Minus Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCG-C 46142 || || ||| | |||||||| |||||||||| |||| |||||| ||| | | | Sbjct 4691915 ATTCCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAATGGATCG-CAGATGATGCTTC 4691857 Query 46143 GACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAG 46202 | | || | ||||| ||||||| || || ||| ||||| |||| || |||||| Sbjct 4691856 GTCGTTTGGTCAGCGTCTGGTGGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTC 4691797 Query 46203 TTTTGCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262 || ||||||||||| | | || ||||||| | ||||| || |||| || ||| Sbjct 4691796 ATTCGCCGCCATCTTCTGGTTGAAGGCCAAGGGACTTATGCCTGGTTTGACCTTCTCCAA 4691737 Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACAC 46322 |||| |||| || || ||||||||| |||| || |||||||| || || || || || Sbjct 4691736 CGAGTTGATCTCTCGAGACGAGGGCATGCACACCGACTTTGCCTG-CT-TATTACTTCA- 4691680 Query 46323 TCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGAG-CATGTTCAAGGAGGCGGTGG 46381 | | | || |||||| | ||| | | | | || ||| ||| ||||| || | Sbjct 4691679 GCACCTTAACCACAAGCCAGACCCCAAGCTCAT-CGAAGCCATCATCACTGAGGCCGTTG 4691621 Query 46382 CCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCAC 46441 |||| ||||| || || || || | || || ||| ||| || || ||||||||||| Sbjct 4691620 CCATCGAGAAAGAATTCTTGACCGATGCTCTTCCCTGTGCTCTTCTTGGCATGAACGCCA 4691561 Query 46442 AGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTG--CA-GCTTCACC 46498 || ||| | || |||||||| || || ||||| |||||| || || | || Sbjct 4691560 AGCTGATGCAACAGTATATCGAGTTCGTCGCCGACCGTCTGCTCCTGGCCATGGGAAACA 4691501 Query 46499 AGCCGAAGCATTTTC-ACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAG 46557 ||| || | | | |||| || || || || ||| | ||||||||||| | Sbjct 4691500 AGC----GCGTCTACAACGCAACTAACCCCTTCAGCTTCATGGAGAACATCTCCCTTGCT 4691445 Query 46558 GGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTATAAG 46599 ||||| || || || ||||| ||||| || || || ||| || Sbjct 4691444 GGCAAGACCAACTTCTTCGAGAAGCGAGTGGGTGACTATCAG 4691403 >seq6 Length=3112757 Score = 134 bits (148), Expect = 1e-26 Identities = 949/1514 (63%), Gaps = 51/1514 (3%) Strand=Plus/Plus Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117 |||||||| || ||||| || ||||| ||||| || | || | ||| || ||| | || Sbjct 985225 TTGACGACTTGGAACTCACCAGCCAAGACACGGCGAGAGTAGATGTTGGAGGTGTATGGC 985284 Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177 || || |||| || ||||| ||||| |||| ||||| ||| || |||||| || || Sbjct 985285 TCGAAGCACTCATTGTTGCCAAGGATCTGAGAGGTCGATGCAGTTGGCATGGGTGCAACG 985344 Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237 | | || ||||| | |||||||| ||| || |||| || | | |||||||||| Sbjct 985345 AGAAGAGAGTTGCGAACACCGTGCTTGGCGATTTCAGCCTTGAGAGCATCCCAATCCCAG 985404 Query 145238 AGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCTGGCGGGGCTG 145297 || || || | |||| ||||||||| ||||| | |||||| | | | | |||||| Sbjct 985405 AGATCTGTGGGGGTGACGTTCCACATGTCATACTGAAGAATGCCTTGGGAGACTGGGCTG 985464 Query 145298 CCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG-GCGAGCTCGCAACTCGCCTCCAGAGC 145356 |||||| || | |||| | ||| | ||| || || | ||| || ||||| Sbjct 985465 CCTTGATAGCTAGAGTAA-GGACCCTCTTCTTGAGCCAGTTGGCAGGATGCAGTAAGAGC 985523 Query 145357 GCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTCATCGCTCTCGTA 145416 | || || ||||| || || |||||||| | ||||| ||| | Sbjct 985524 AGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGCTGGCGTGCTTCGGGAGAGTCGAA 985583 Query 145417 CGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCCGATGGGCCG 145476 || | ||||| | || ||||| ||||| || || | |||| ||| | ||| || Sbjct 985584 AGGTAGACGCAGAGCAAGGAAGGCATCCGCGAGACCTTGAACGCCCAAGCCAACGGGGCG 985643 Query 145477 ATGTTTCATGTTGCTCAT-----CCTCGCCGACTCGATAGGATATCGATTACGGTCGATA 145531 ||| | |||||| | | || ||| | ||| | | | || ||| || Sbjct 985644 GTGTCTGTAGTTGCTGTTTTGTGCTTCAATGACGGGGTAG----TAGTTGAC-GTCAATG 985698 Query 145532 ATTTTATTCAAGTTTCGCACTACTACCTTTGTAA---TGTGCCG-CAACTTTTCAAAGTC 145587 || || |||||||| || || |||| | |||| | | || ||||||| Sbjct 985699 ATCTTGTTCAAGTTGCGGGTCACAACCTGAACGACTTCGTGCAGACGAC----CAAAGTC 985754 Query 145588 AAA------CCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATT 145641 | |||||| | |||| ||| || | | |||| || || | ||| Sbjct 985755 GTATTCGCCCCGAGCTTGGTCA------ACAAAGGTGGGCAGAGCGAGGGAGGCAAGATT 985808 Query 145642 ACAAACTGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATTGCTACA 145701 || || || ||| |||| | | || | || ||||||| ||| | |||| | Sbjct 985809 GCAGACGGCAACCTCATCGGGAGCAGTATACTCGACAATCTCGGTGCAAAGATTGGAGCT 985868 Query 145702 TTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCAT 145761 | ||||||| || ||||| | ||| || || ||| |||||| || |||||||| ||||| Sbjct 985869 TCTGATGGTACCAAGATTCTTCTGGTTGCTCTTCTCGTTGCAGGCATCCTTGTACAGCAT 985928 Query 145762 GTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAG---TCCTGCGC 145818 || || || ||||| ||| | || ||| || || | || | ||| || Sbjct 985929 ATAAGGGGTACCGGTCTCGGTCTGTG---CCTCGAGAATGGCGTACCAGAGCTTCTGGGC 985985 Query 145819 ACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGC 145878 || ||| | |||||| |||| ||||| | ||| || | || ||| | Sbjct 985986 TTTGACAGTCTGGCGACCGCGGCCTTCTTTCTCGTACTGTTCGTAAAGGGCTTCGAACTC 986045 Query 145879 GGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCC 145938 || || ||| | || || ||| || |||||| || | || | ||| | Sbjct 986046 CTTGCCATAAACATCAGCGAGACCAGGAGCCTCGTTGGGGCAGAAAAGGGTCCAATCCTG 986105 Query 145939 GTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCG 145998 ||| | || |||| ||| || | ||| || |||||| ||||| | || ||| || Sbjct 986106 GTTCTTCTCAACACGCTGCATGAAGAGATCGGGTGTCCACAGGGCGTAGAACAGGTCACG 986165 Query 145999 CGCTTTGCAATCCTCAGCACCCATGTTTCGCT-TCAAATTAAGCACACT-ATAGATGTCC 146056 || | | | || ||||| ||| | ||| || ||| |||| ||| || Sbjct 986166 AGC-ACGAACTTCTTCCTTGCCATGGTTCTTTCTCAGGTTCAGC-CACTCGAAGACATCG 986223 Query 146057 GCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCC 146113 |||||||| || || | || | ||| | ||| || || ||||| |||||||| Sbjct 986224 GCGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCGGGCCGCTTGTTGCCTCCCTGGTCG 986283 Query 146114 ACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCG 146173 |||| || | ||||||| ||||| | | |||||| || |||| | | | |||| Sbjct 986284 ACGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGGGGATGAGGCCGTTTGATGTGCCG 986343 Query 146174 TTCGTAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCG 146233 || || | || || ||| || || | ||||||| | || | || | |||| Sbjct 986344 TTGGTTCCGGCGATATAGGAGCCAGTGGCACGAATGCAATGAGCGTTGAGACCAATACCG 986403 Query 146234 CCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTA 146293 ||| || |||||| || || ||| ||| || || |||||||| |||||||| Sbjct 986404 CCGGCGGTCTTGGAGATCATTGCACAGGTCTTGAGAGTATCATAGATGCCTTCAATGCTG 986463 Query 146294 TCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCG 146351 ||| |||| ||| | | || ||||| || ||| ||| | || || || || Sbjct 986464 TCGGACTTC--ATGTCAATCAAGAAGCAGGATGACAACTGGGGTTGAGGAGTGCCAGCGT 986521 Query 146352 AGAACAACGTCGGGCTCGCGTGCGT-AAACATTTTTCGGCTCATCATCCGATACGTTTCG 146410 ||| | || || || || || || || || | || ||| | || || || Sbjct 986522 TGAAAAGGGTTGGCGAGGCATGAGTGAAGCACTTCT-GGGACATGAGGTTGTATGTCTCA 986580 Query 146411 ATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGG 146470 || || | | | ||| | ||| |||||||||| || || |||||||| | ||||| Sbjct 986581 ATGGCCTTCTCGACGTCATTGCCGTGAATGCCCACGGCCACACGCATGAGAAGATGTTGT 986640 Query 146471 GGCCGCTCCGCCACTTGATTGTCAATCTTTAACAAATAGCCGTTCTCCAGGGTTTTGTAT 146530 || | ||| || |||| ||| ||||||| | || ||| |||||| || ||| | Sbjct 986641 GGTCTCTCTGCAACTTTGTTGCCAATCTTGAGCAGGTAGGATCTCTCCAAAGTCTTGAAA 986700 Query 146531 CCGAAAAATTTGTA 146544 || || ||| ||| Sbjct 986701 CCAAAGTATTGGTA 986714 >seq1 Length=6137194 Score = 111 bits (122), Expect = 1e-19 Identities = 133/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104 ||||||| |||||||||||||| | |||||| || || |||||||| || || ||| Sbjct 5194746 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGA 5194805 Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164 | || ||||||||||||||||| |||||||| ||||| ||| || ||||| | | Sbjct 5194806 TCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT 5194865 Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224 | | || |||| ||||| | || | ||| | ||| || || || || || || |||| Sbjct 5194866 CGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 5194925 Query 131225 A 131225 | Sbjct 5194926 A 5194926 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| || | ||| || || || || | |||||||||||| || |||||||| || Sbjct 441153 GCCACCACGAAGACGAAGGACCAAGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCAGA 441094 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||| || |||||| || |||||||| ||| |||| | ||| |||||||| || || Sbjct 441093 CAGGGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATCAGACGTTGCTGGTCAGGTGG 441034 Query 131127 GATTCCTTCTTTGTC 131141 ||| || || ||||| Sbjct 441033 GATGCCCTCCTTGTC 441019 >seq2 Length=5498963 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | ||| || || | ||| | ||| || |||||||| |||||||||||||| Sbjct 3944231 CCACCACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTT 3944172 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| || ||||| || ||| |||| | || ||||| || ||||| Sbjct 3944171 AGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGA 3944112 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || ||||| || || ||| || ||||| | || | || ||| ||||||| | Sbjct 3944111 ATGCCTTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTGGACTCCACC 3944052 Query 131188 TCGACGGTAACGGTTTTACCGGT 131210 || | ||| | ||| || ||||| Sbjct 3944051 TCAAGGGTGATGGTCTTTCCGGT 3944029 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| | ||||| | ||| | || |||||||| ||||||||||| || | Sbjct 3944687 CCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAC 3944628 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || || | ||| || || ||| |||| || ||||| ||||| ||||| Sbjct 3944627 AGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGA 3944568 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || ||||| || ||| || ||||| | || | || |||| ||||||| Sbjct 3944567 ATACCCTCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACT 3944508 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | || | || || || || || || || ||||| || ||||| Sbjct 3944507 TCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012746898560