Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq6 140 2e-28 seq2 123 2e-23 >seq6 Length=3112757 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 2917210 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 2917269 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 2917270 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2917304 >seq2 Length=5498963 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149 |||||| | || | |||||||||||| || |||||||||||||| || ||||| || || Sbjct 3944916 ACCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGA 3944857 Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209 | | || | || || |||||||| || ||||| || | || || ||||| | || Sbjct 3944856 AAGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGG 3944797 Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269 || || |||||||| || ||| ||| || || | || || || ||| || Sbjct 3944796 GATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGAC 3944737 Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||| |||||||| || || |||| |||||| ||||| |||||||| Sbjct 3944736 TTCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334947163260479