Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2 113 4e-20 seq1 98.7 8e-16 >seq2 Length=5498963 Score = 113 bits (124), Expect = 4e-20 Identities = 133/180 (74%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 ||||| || || |||| ||||| ||||| ||| ||| ||| | ||| || |||| Sbjct 3944029 ACCGGAAAGACCATCACCCTTGAGGTGGAGTCCAGCGACACCATTGACAATGTCAAGTCC 3944088 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || || || ||||| || ||||| || ||||| ||||| ||||| || || || || Sbjct 3944089 AAGATCCAGGATAAGGAAGGCATTCCTCCTGATCAGCAACGCCTTATCTTCGCTGGAAAG 3944148 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || | |||||| ||||||| | |||||||||||| ||||| ||||| ||| | ||| Sbjct 3944149 CAACTCGAGGATGGCCGCACCCTAAGCGATTACAACATCCAAAAGGAATCTACCTTGCAT 3944208 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || || | || || || || ||||||| ||||| || | || Sbjct 3944461 ATGCAAATCTTCGTCAAGACCCTCACAGGCAAGACAATCACTCTAGAAGTCGAGTCATCC 3944520 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| ||| || ||||| || ||||||||||| || || ||| Sbjct 3944521 GACACCATCGACAATGTCAAGTCAAAGATCCAAGATAAAGAGGGTATTCCTCCAGACCAA 3944580 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || || ||||| |||||||| || ||| || || | || || |||||| Sbjct 3944581 CAGCGATTGATCTTCGCCGGTAAACAGTTGGAAGATGGTCGGACTCTGTCAGACTACAAC 3944640 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || || || || | ||| | || | || |||| || ||| Sbjct 3944641 ATTCAGAAGGAGTCTACTCTTCATCTCGTGCTCAGACTGCGAGGTGGT 3944688 >seq1 Length=6137194 Score = 98.7 bits (108), Expect = 8e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302 || || || || |||| ||||| ||||| | |||| ||| | ||| || |||| Sbjct 5194911 ACGGGCAAGACCATCACCCTTGAGGTGGAGTCGTCCGACACCATCGACAATGTCAAGTCC 5194852 Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362 || || ||||||||||| || ||||| || || || || || | || |||||||| || Sbjct 5194851 AAGATCCAAGACAAGGAAGGAATTCCTCCGGACCAGCAGCGATTGATCTTTGCCGGAAAG 5194792 Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406 ||| | || ||| ||||||| || |||||||||||| ||||| Sbjct 5194791 CAGCTCGAAGATGGCCGCACCCTCAGCGATTACAACATCCAAAA 5194748 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 22307 TTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGT 22366 ||| |||||||||||| || ||||| || || |||||||| || || |||||||| || Sbjct 441014 TTCTAGACAAGGAGGGCATCCCACCTGACCAGCAACGTCTGATCTTCGCCGGCAAGCAAC 441073 Query 22367 TAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACATTTAG 22426 | ||||| ||| ||| | || || |||||||| || || || || ||| | || || | Sbjct 441074 TCGAGGACGGCCGAACCCTGTCTGACTACAACATCCAGAAGGAGTCGACCCTGCACTTGG 441133 Query 22427 T 22427 | Sbjct 441134 T 441134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727953961085