Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 seq1 95.1 2e-14 >seq3 Length=5104443 Score = 98.7 bits (108), Expect = 2e-15 Identities = 293/443 (66%), Gaps = 22/443 (5%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 |||||||| || | |||||| | || ||||| |||||||||| ||||||||| || Sbjct 4691425 TCGAAGAAGTTGGTCTTGCCAGCAAGGGAGATGTTCTCCATGAAGCTGAAGGGGTTAGTT 4691484 Query 251623 GCATTGTACT---GCTTGGG----ATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAA 251675 || ||||| ||||| ||||||| | || ||| ||||| || || || Sbjct 4691485 GCGTTGTAGACGCGCTTGTTTCCCATGGCCAGGAGC-----AGA--CGGTCGGCGACGAA 4691537 Query 251676 CTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTC 251735 ||| | ||||||| |||||| | | ||||||||||| | | ||| |||| || || Sbjct 4691538 CTCGATATACTGTTGCATCAGCTTGGCGTTCATGCCAAGAAGAGCACAGGGAAGAGCATC 4691597 Query 251736 ACAGATGAATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCTTCACCTGTGCCAG 251795 | |||||| || ||| ||||||| ||||| | | || |||| || || | Sbjct 4691598 GGTCAAGAATTCTTTCTCGATGGCAACGGCCTCAGTGATGA-TGGCTTC-GATGAGCTTG 4691655 Query 251796 AG--ACAGCTTGTTCTCCAGCT--TTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGAC 251851 | |||||| | || | | |||| | ||| | |||| | ||||| | Sbjct 4691656 GGGTCTGGCTTGTGGTTAAGGTGCTGAAGTA-ATAAGC-AGGCAAAGTCGGTGTGCATGC 4691713 Query 251852 CCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCC 251911 ||||||| ||| ||| ||||||||||| | || |||||||| | || | | Sbjct 4691714 CCTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTCAAACCAGGCATAAGTCCCTTGGCCT 4691773 Query 251912 TGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATG 251971 | | ||||||||| ||| || || |||||||| | | |||||| ||| | ||| Sbjct 4691774 TCAACCAGAAGATGGCGGCGAATGAGCCAGAGAAGAAGATACCCTCAACAGCAGCGAATG 4691833 Query 251972 CAACAAGGCGCTCAGCAAACGAC 251994 | || || |||| | |||||||| Sbjct 4691834 CCACCAGACGCTGACCAAACGAC 4691856 >seq1 Length=6137194 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/144 (76%), Gaps = 2/144 (1%) Strand=Plus/Plus Query 280680 GGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAG 280739 |||||||| |||| | | ||||||| || || ||||||||||| ||||||||| Sbjct 5532470 GGTCTGGATGCCGAACTCATCTCTCACTCCCGTATGCGCGGTCTTTCCGGAGGCCAGCGT 5532529 Query 280740 GTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTTCTCGACGA 280798 ||||| ||||| | | || || | ||||||| || || |||||||||||||||| Sbjct 5532530 GTCAAGGTTGTCCTTGCTGCCTGCACA-TGGCAACGACCCCATTTGATCGTTCTCGACGA 5532588 Query 280799 GCCTACCAACTATCTGGACCGCGA 280822 ||| |||||||| ||||| || || Sbjct 5532589 GCCCACCAACTACCTGGATCGTGA 5532612 Score = 84.2 bits (92), Expect = 4e-11 Identities = 149/214 (70%), Gaps = 10/214 (5%) Strand=Plus/Plus Query 280146 CAGGTTTCTATGAACTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACC 280205 ||||| ||| || ||| | |||| ||||| || ||||| ||||| || ||||||||| Sbjct 5531891 CAGGTGTCTCTGGGCTCCAGAATTGCCGTCATCGGCCCCAACGGTGCTGGCAAGTCTACC 5531950 Query 280206 CTAATCAAAGTCCTGACTGGCGA---GA--CCCAGGCCACTGAGGGGTCCGTTTGGAAGC 280260 | |||| | |||| || || || |||| |||||| | | || | ||| Sbjct 5531951 TTGGTCAACTGCTTGACCGGTGAATTGATTCCCA--CCACTGGTGAG---GTCTACCAGC 5532005 Query 280261 ATCCCAACATGCGGATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACC 280320 || ||||| || || || ||| || ||||||||||| |||||||| ||||| Sbjct 5532006 ATGAGAACATCCGTATTGCATACATCAAGCAGCACGCTTTTGCTCACATCGATAACCATT 5532065 Query 280321 TGGACATGACTCCTAACCAATACATTCAGTGGCG 280354 |||||| |||||| ||||||| |||||||| Sbjct 5532066 TGGACAAGACTCCCTCGGAATACATCCAGTGGCG 5532099 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836681477569