Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 159 6e-34 seq1 156 8e-33 seq6 86.0 1e-11 >seq2 Length=5498963 Score = 159 bits (176), Expect = 6e-34 Identities = 157/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || || ||||| || || ||||| || || || || |||| |||||||| ||||| Sbjct 3944663 TGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGACCATCTTCCAACTGT 3944604 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || |||||||| || | || |||||||| || ||||| || || || ||||| |||||| Sbjct 3944603 TTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGAATACCCTCTTTATCTTGGATCTTT 3944544 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 | |||||| ||||||||||| | ||| || ||||| | ||||| || || || ||| Sbjct 3944543 GACTTGACATTGTCGATGGTGTCGGATGACTCGACTTCTAGAGTGATTGTCTTGCCTGTG 3944484 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 |||||||||||||| || ||||| Sbjct 3944483 AGGGTCTTGACGAAGATTTGCAT 3944461 Score = 154 bits (170), Expect = 3e-32 Identities = 175/235 (74%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| | || || || || | ||| ||||| || || ||| ||| ||||||||||| | Sbjct 3944923 TTTACTGACCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGT 3944864 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||||| || || | |||||||| || || || || || || || | || || || | Sbjct 3944863 AGTCGGAAAGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGAT 3944804 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | ||||| || || || |||||||| ||||||| ||||||| ||||||||||| | | Sbjct 3944803 CAGGTGGGATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACG 3944744 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||| | || || || || || || ||||| |||||||| |||||||| Sbjct 3944743 ATTCGACTTCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 138 bits (152), Expect = 2e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || ||||| | || | || || ||||| || || |||||||| || || Sbjct 3944459 CCACCACGGAGGCGGAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTC 3944400 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | ||||| || ||||| ||||| | ||||| || || ||| Sbjct 3944399 AGGGTGCGACCGTCTTCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGA 3944340 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTAC 68413 ||||||||||| || ||||| || | ||| ||| || ||||| || ||| || || || Sbjct 3944339 ATGCCTTCCTTATCCTGAATTTTGGACTTAACGTTGTCAATGGTATC-GCTAGACTCCAC 3944281 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| | ||||||||| ||||| ||||| ||||||||||| || ||||| Sbjct 3944280 TTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 109 bits (120), Expect = 1e-18 Identities = 130/174 (75%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324 || || || ||||||||||| |||||| || || | ||||| || | ||||| || Sbjct 3944201 GTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATCCTCGAGTTGCTTTCCA 3944142 Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384 ||||| || || | ||| || || || |||||||||||||| || || ||||| | |||| Sbjct 3944141 GCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGGATCTTGGACTTG 3944082 Query 68385 ACGGCCTCGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 || || |||||||| ||| || || || || | ||||||||| ||||| || Sbjct 3944081 ACATTGTCAATGGTGTC-GCTGGACTCCACCTCAAGGGTGATGGTCTTTCCGGT 3944029 >seq1 Length=6137194 Score = 156 bits (172), Expect = 8e-33 Identities = 142/179 (79%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATG 68333 ||||||||||| |||||| ||| || | |||||||| | |||||| ||||| || || Sbjct 5194748 TTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGATC 5194807 Query 68334 AGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCG 68393 | || || ||||| || ||||| |||||||||||||| ||||| | |||||| ||| Sbjct 5194808 AATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCG 5194867 Query 68394 ATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 |||||||| | || || || || | ||||||||| || |||||||||||||||||||| Sbjct 5194868 ATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGAA 5194926 >seq6 Length=3112757 Score = 86.0 bits (94), Expect = 1e-11 Identities = 226/340 (66%), Gaps = 4/340 (1%) Strand=Plus/Plus Query 31713 TCGTCCGTAGAAGTGTATTCGACAATCTCGGCACAAAGATTGCTGCCCGTGATGGTGCCG 31772 || || | || ||| || ||||||||||||| ||||||||| || ||||||| || Sbjct 985822 TCATCGGGAGCAGTATACTCGACAATCTCGGTGCAAAGATTGGAGCTTCTGATGGTACCA 985881 Query 31773 GCATTGGACTGCATGTTCTTCACGTT-CACGCTGTCCTTGTTGAGCACGTAAGGCATGCC 31831 ||| ||| || ||||| |||| || || ||||||| |||| ||||| | || Sbjct 985882 AGATTCTTCTGGTTGCTCTTCTCGTTGCAGGC-ATCCTTGTACAGCATATAAGGGGTACC 985940 Query 31832 CGTCTCGATCTGCGTGATGATCATCGCATTCCAGACATCGCGCGCTTTGAC-GACTTTCT 31890 |||||| |||| | || || || | ||||| | | |||||||| | || | Sbjct 985941 GGTCTCGGTCTGTGCCTCGAGAATGGCGTACCAGAGCTTCTGGGCTTTGACAGTCTGGCG 986000 Query 31891 TCGCACGCCCCTCGGACTCGTAGCGAAGATACAGGTCCTCGTACTCCTTGCCAAAGGCAT 31950 | | || || || |||||| | || ||| | ||| ||||||||||| | ||| Sbjct 986001 AC-CGCGGCCTTCTTTCTCGTACTGTTCGTAAAGGGCTTCGAACTCCTTGCCATAAACAT 986059 Query 31951 CGGTTAGACCGGGACACTCCTTGGGGTCGAAGAGCGACCATGCGACATCGGCCTCTACTC 32010 | | ||||| ||| ||| |||||| ||| || | ||| | | ||| || | Sbjct 986060 CAGCGAGACCAGGAGCCTCGTTGGGGCAGAAAAGGGTCCAATCCTGGTTCTTCTCAACAC 986119 Query 32011 GCTTCATGAACAGGTCGTTCAGCCACATCGCGTAAAACAG 32050 ||| |||||| || ||| ||||| ||||| ||||| Sbjct 986120 GCTGCATGAAGAGATCGGGTGTCCACAGGGCGTAGAACAG 986159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622296317480