Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq6 306 7e-78 seq3 230 4e-55 >seq6 Length=3112757 Score = 306 bits (338), Expect = 7e-78 Identities = 890/1362 (65%), Gaps = 49/1362 (4%) Strand=Plus/Plus Query 244090 GTTCACCACCTGAAACTCTCCCGACAGCACGCGGCGCTGGTAGAGGTTGCTGCTGAGCGG 244149 ||| || || || ||||| || | || || ||||| ||||| |||| | || || Sbjct 985224 GTTGACGACTTGGAACTCACCAGCCAAGACACGGCGAGAGTAGATGTTGGAGGTGTATGG 985283 Query 244150 CTCGATGCTCTCCGTGTTGCCCAGTATCTGCGCCGTGCTCGCAGTCGGCATGGGCGACAC 244209 ||||| || ||| ||||||| || ||||| | || ||||| |||||||| | || Sbjct 985284 CTCGAAGCACTCATTGTTGCCAAGGATCTGAGAGGTCGATGCAGTTGGCATGGGTGCAAC 985343 Query 244210 CAGCAGACTGTTCCTCACGCCGTGCCTCTGGATGCGGAGTCT-GAGCTCGTTCCAGTCCC 244268 || ||| ||| | || |||||| | ||| || || ||| | | ||| |||| Sbjct 985344 GAGAAGAGAGTTGCGAACACCGTGCTTGGCGATTTC-AGCCTTGAGAGCATCCCAATCCC 985402 Query 244269 ACATGCCCGAGAGGTCCTCGCGTTTGAGGCCCCACATGTCAAACTGCAGCAGCCCCTTGC 244328 | ||| || | | ||| | |||||||||| |||| || | || | | Sbjct 985403 A---------GAGATCTGTGGGGGTGACGTTCCACATGTCATACTGAAGAATGCCTTGGG 985453 Query 244329 TGACGGGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCT 244388 ||| |||||||| | ||| | | ||| ||||| || || ||||| | ||| Sbjct 985454 AGACTGGGCTGCCTTGATAGCTAGAGTAAGGACCCTCTTCTTGAGCCAGTTGGCAGGATG 985513 Query 244389 CGTCGAGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGC 244448 | || || || | |||||||||||| |||||| |||| | | ||| || | | Sbjct 985514 CAGTAAGAGCAGCATGGTAGATGGTCTCAAAGATCTGGATGTTGAGCTGGCGTGCTTCGG 985573 Query 244449 CGCAGGTGAAGGG--GATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGAT 244506 || ||| || || || | || | |||| | || || || || || ||||| | Sbjct 985574 GAGAGTCGAAAGGTAGACGCAGAGCA--AGGAAGGCATCCGCGAGACCTTGAACGCCCAA 985631 Query 244507 GCCGATGGGTCTGTGTCGCTTGTTGGAGCGCATGGCTTCGGGCACGGGGTAAAAGTTGCC 244566 ||| | ||| | ||||| | |||| | ||||| |||||||| ||||| | Sbjct 985632 GCCAACGGGGCGGTGTCTGTAGTTGCTGTTTTGTGCTTCAATGACGGGGTAGTAGTTGAC 985691 Query 244567 GTCGATCACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAA 244626 ||| || | |||||| | ||||||||| | | | ||||| ||| ||| | ||| Sbjct 985692 GTCAATGATCTTGTTCAAGTTGCGGGTCACAACCTGAACGACTTCGTGCAGACGACCAAA 985751 Query 244627 GTCGTACTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCT 244686 |||||| ||| || || |||| | ||||| | || |||| | Sbjct 985752 GTCGTATTCG-------CCCCGAGCTTGGTCA-----ACAAAGGTGGGCAGAGCGAGGGA 985799 Query 244687 GGCCAGGTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAG 244746 ||| || ||||||||||| ||||| || | || |||| ||||||||||||||| || Sbjct 985800 GGCAAGATTGCAGACGGCAACCTCATCGGGAGCAGTATACTCGACAATCTCGGTGCAAAG 985859 Query 244747 GTTACTGCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTGGCGTTGCAGGCGTCCTT 244806 || || ||||||| || || | || || ||| ||| |||||||||| ||||| Sbjct 985860 ATTGGAGCTTCTGATGGTACCAAGATTCTTCTGGTTGCTCTTCTCGTTGCAGGCATCCTT 985919 Query 244807 GTAGAGCATGAAGGGCCCCCCGGTCTCGAGCTGGGCGACGAGGACGCTGTTCCAGAGGTC 244866 ||| ||||| | || ||||||||| ||| || |||| | | || |||||| | Sbjct 985920 GTACAGCATATAAGGGGTACCGGTCTCGGTCTGTGCCTCGAGAATGGCGTACCAGAGCTT 985979 Query 244867 CCTAGCCTTGACCGTCCTGCGAGCCTTGCCCTCTGCCTCGTAGCGGGTGTACAGGGCCTC 244926 | || ||||| ||| |||| | ||| ||| |||||| | ||| ||||| || Sbjct 985980 CTGGGCTTTGACAGTCTGGCGACCGCGGCCTTCTTTCTCGTACTGTTCGTAAAGGGCTTC 986039 Query 244927 GAACTCGGGGCCCCAGACCTCGTCTAGGCC--GGGGCACGACGCCGGGCACATGAGACTC 244984 |||||| ||| | || || | || || | | | || | ||||| | || || Sbjct 986040 GAACTCCTTGCCATAAACATCAGCGAGACCAGGAGCCTCGTTG--GGGCAGAAAAGGGTC 986097 Query 244985 CACTCGCCGCCGTCCTTGACCCTCTGCATGAAGAGGTCGGGGATCCAGAGGGCCTGGAAG 245044 || || | | || || | |||||||||||| ||||| |||| ||||| | ||| Sbjct 986098 CAATCCTGGTTCTTCTCAACACGCTGCATGAAGAGATCGGGTGTCCACAGGGCGTAGAAC 986157 Query 245045 AGGTCCCTGGTCCTCTGCTCGTCCGAGCCAGTGTTCTTCCTCAGCTCCAAAAAGTCAAAG 245104 ||||| | | | || ||| |||| |||||| ||||| | || | || ||| Sbjct 986158 AGGTCACGAGCACGAACTTCTTCCTTGCCATGGTTCTTTCTCAGGTTCAGCCACTCGAAG 986217 Query 245105 ACGTCGACGTGCCAGGGCTCCATGTAGACAGCGAGGGCGCCGGGCCGCTTGTTGCCTCCC 245164 || ||| ||||||| ||||||| ||| | || | ||| ||||||||||||||||||||| Sbjct 986218 ACATCGGCGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCGGGCCGCTTGTTGCCTCCC 986277 Query 245165 TGGTCCACCATCCTCTCGAGC----GCGTTGAAGATGCGCAGGGTAGGCACTATGCCGTT 245220 ||||| | | | ||||| |||||||| | || | || | | |||||| Sbjct 986278 TGGTCGA----CGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGGGGATGAGGCCGTT 986333 Query 245221 AGAGTGGCCGTTGGTGCCCTTGATGTAGGCGCCCTTGCCCCTGAGGTTGC--TGA---TG 245275 || ||||||||| || ||| |||| ||| || | | | ||| ||| | Sbjct 986334 TGATGTGCCGTTGGTTCCGGCGATATAGGAGCCAGTGGCAC---GAATGCAATGAGCGTT 986390 Query 245276 GACATGCCTAGTCCGCCGGCGTGCTTGGAGATGAGGGCGCAGCTCTTGATGGTGTCTGCT 245335 || | || | ||||||||| ||||||||| | || ||| |||||| || || Sbjct 986391 GAGA--CCAATACCGCCGGCGGTCTTGGAGATCATTGCACAGGTCTTGAGAGTATCATAG 986448 Query 245336 ATGCCCTCCATGCTGTCCGACTTCATGTTGAGCAGAAAGCAGGAGGACAGCTGGGGCTTG 245395 ||||| || |||||||| |||||||||| | || |||||||| |||| |||||| | Sbjct 986449 ATGCCTTCAATGCTGTCGGACTTCATGTCAATCAAGAAGCAGGATGACAACTGGGGTTGA 986508 Query 245396 GGGCTGCACGAGTTGAACAGAGTGGGGCTGGCGTGGGTAAAG 245437 || ||| | |||||| || || || ||| || || ||| Sbjct 986509 GGAGTGCCAGCGTTGAAAAGGGTTGGCGAGGCATGAGTGAAG 986550 >seq3 Length=5104443 Score = 230 bits (254), Expect = 4e-55 Identities = 386/545 (71%), Gaps = 19/545 (3%) Strand=Plus/Minus Query 42609 CTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCGCTCAAC 42668 |||||| | ||||| || || || ||||||||| |||||||| |||||||| | || Sbjct 4691936 CTGTTCGACGCCATTGACACCATTCCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAA 4691877 Query 42669 TGGATCG-AGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGCCGTCGA 42727 ||||||| ||| | | | |||| || || | ||||| || || | || || || Sbjct 4691876 TGGATCGCAGA-TGATGCTTCGTCGTTTGGTCAGCGTCTGGTGGCATTCGCTGCTGTTGA 4691818 Query 42728 GGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGAAGGTGTCGAT 42787 ||| ||||||||||| ||| | |||||| ||||||||||| | ||| |||| || Sbjct 4691817 GGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGTTGAAGGCCAAGGGACTTAT 4691758 Query 42788 GCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATAGGGACTT 42847 ||| || | |||||||| ||||| | ||| | |||||||| |||| | ||||| Sbjct 4691757 GCCTGGTTTGACCTTCTCCAACGAGTTGATCTCTCGAGACGAGGGCATGCACACCGACTT 4691698 Query 42848 TGCCTGCCTCCTGTTCTCGAGCCACCTCAGGCACAAGCC---CTCGAAGGAGCGGGTCCG 42904 ||||||| | | | || ||| |||| | |||||||| | | ||| | || Sbjct 4691697 TGCCTGCTTATTACT-TC-AGC-ACCTTAACCACAAGCCAGACCCCAAG---CTCATCGA 4691644 Query 42905 GGCCATCATCACGGAGGCCGTGGAGATCGAGAAGGAGTTCCTCACGCAGTCGCTGCCCGT 42964 ||||||||||| |||||||| | |||||||| || ||| | || | | || ||| | Sbjct 4691643 AGCCATCATCACTGAGGCCGTTGCCATCGAGAAAGAATTCTTGACCGATGCTCTTCCC-T 4691585 Query 42965 GTCC-CTGGTCGGCATGAACCACGACCTCATGTGCAAGTACATCCAGTACGTCGCCGACC 43023 || | || | ||||||||| | | || ||| |||| ||| ||| ||||||||||| Sbjct 4691584 GTGCTCTTCTTGGCATGAACGCCAAGCTGATGCAACAGTATATCGAGTTCGTCGCCGACC 4691525 Query 43024 ATCT---CCTGTGCCAGATGGGTCTCAGCCGCCTCTACAACACGCCGTGCCCCTTCGACT 43080 ||| |||| |||| |||| || ||| |||||||| | | ||||||| || Sbjct 4691524 GTCTGCTCCTG-GCCA--TGGGAAACAAGCGCGTCTACAACGCAACTAACCCCTTCAGCT 4691468 Query 43081 TTATGGAGAACATCTCGTTGGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGCCGACT 43140 | |||||||||||||| | | |||||||||||||| ||||||||||| || | |||| Sbjct 4691467 TCATGGAGAACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGAGTGGGTGACT 4691408 Query 43141 ACCAG 43145 | ||| Sbjct 4691407 ATCAG 4691403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944339093761840