Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2 179 9e-40 seq1 100 7e-16 >seq2 Length=5498963 Score = 179 bits (198), Expect = 9e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||| | ||| ||| || ||||| || ||||| Sbjct 3944459 CCACCACGGAGGCGGAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCACTC 3944400 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | ||| ||||| |||||||| |||||||||||| | || Sbjct 3944399 AGGGTGCGACCGTCTTCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGAGGA 3944340 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| |||||||| ||||| | || ||||| || || | |||||| || || ||| Sbjct 3944339 ATGCCTTCCTTATCCTGAATTTTGGACTTAACGTTGTCAATGGTATCGCTAGACTCCACT 3944280 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| ||||| |||||||||||||| || ||||| Sbjct 3944279 TCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 123 bits (136), Expect = 6e-23 Identities = 166/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || ||||| || |||||||||| || || || || || || ||||| | Sbjct 3944687 CCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAC 3944628 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || ||||| || ||||| || |||||||||| |||||||| ||||| Sbjct 3944627 AGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGG---TCTGGA 3944571 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || |||||||| ||||| || | || || || || || | ||| || || Sbjct 3944570 GGAATACCCTCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCG 3944511 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| || ||||| ||||| || || || ||||||||||| || ||||| Sbjct 3944510 ACTTCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 113 bits (124), Expect = 1e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || ||||| | || ||| |||||||| || || ||| Sbjct 3944231 CCACCACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTT 3944172 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | ||| ||||| |||||||| || || || ||| | || Sbjct 3944171 AGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGA 3944112 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||||||||| || | || || || || || | ||||| || || || Sbjct 3944111 ATGCCTTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTGGACTCCACC 3944052 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCA 288451 || || ||||| ||||| ||||||| Sbjct 3944051 TCAAGGGTGATGGTCTTTCCGGTCA 3944027 Score = 98.7 bits (108), Expect = 2e-15 Identities = 224/330 (68%), Gaps = 8/330 (2%) Strand=Plus/Minus Query 325964 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 326023 ||||| ||||| ||||||| ||||||| || || | || ||| ||||||| | Sbjct 2338753 ACGATTGGCGTAATGAACTCGACCAAGAACTTCGGGATCTTCAGGAGACTAGGGAACTGG 2338694 Query 326024 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 326083 || |||||||| || | | || || ||| |||| || |||| || ||| Sbjct 2338693 ACTTGTAAAAAGTTGATCAACAACCCTTTGATATGACTTCCATCGTGATCCTGATCAGTC 2338634 Query 326084 ATGATCATCACATGACCGTAACGAA-GCGAGGACGTGTCTTTGTACACTTTACCGGTTTG 326142 |||||||||| |||||||||||||| || || ||||| |||| || || | ||| Sbjct 2338633 ATGATCATCAAATGACCGTAACGAAGGCCTTGA-GTGTCGGTGTAGACCTTCTTGTGTTG 2338575 Query 326143 AAGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCAC 326199 || || | ||| || || | ||| || ||| | ||||| | ||| ||| | || Sbjct 2338574 GAGACCAAGGAAATTCTTGATGTTCTG-AATCTCTGCATTCTTGGAGAT--TTGATCGAC 2338518 Query 326200 GGATGCATCGCGGACGTTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCG 326259 || ||||| || || || | | ||||||||||| ||||| |||||| | || | Sbjct 2338517 AGAGGCATCACGAACATTGAGCAACTTTCCACGAAGCGGGAAAACTCCAAACAGATCCGG 2338458 Query 326260 ACCGACCACGGACAGCCCTGCGATTGCAAG 326289 ||| || ||||| | ||||| || ||||| Sbjct 2338457 ACCAACAACGGAACGACCTGCCATGGCAAG 2338428 >seq1 Length=6137194 Score = 100 bits (110), Expect = 7e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 288272 GAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTT 288331 |||||| || | | |||||||| || || ||| ||| ||||| || ||||| | || | Sbjct 5194734 GAATCGAGCGTACCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCT 5194793 Query 288332 TTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCG 288391 |||| || ||||||| ||||| || || |||||||| || || ||||| || | Sbjct 5194794 TTCCGGCAAAGATCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGG 5194853 Query 288392 CTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCA 288451 || || || || || | ||| ||| || || || || ||||| ||||| || || | Sbjct 5194854 ACTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGA 5194913 Query 288452 GAGTCTTGACGAA 288464 | ||||||||||| Sbjct 5194914 GGGTCTTGACGAA 5194926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179654263971102