Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq3 120 7e-22 seq2 102 2e-16 >seq3 Length=5104443 Score = 120 bits (132), Expect = 7e-22 Identities = 363/552 (66%), Gaps = 9/552 (2%) Strand=Plus/Minus Query 243208 CTTTTCGACGCCATCGAAAACATTCCGGCGGTTCATAACAAGGCAAAATGGGCTCAGAAG 243267 || ||||||||||| || | |||||| | | || ||||| | |||||| ||| Sbjct 4691936 CTGTTCGACGCCATTGACACCATTCCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAA 4691877 Query 243268 TGGCT---AGAACCCGGTAAATCATTTGCTGAGCGTCTCGTCGCCTGGGTGTGC-GTTGA 243323 ||| | ||| | | || |||| | ||||||| || || | | ||| ||||| Sbjct 4691876 TGGATCGCAGATGATGCTTCGTCGTTTGGTCAGCGTCTGGTGGCATTCGC-TGCTGTTGA 4691818 Query 243324 AGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGTGTGAT 243383 ||||| | || || || ||| ||||||||| ||| || | ||| || | || Sbjct 4691817 GGGTATCTTCTTCTCTGGCTCATTCGCCGCCATCTTCTGGTTGAAGGCCAAGGGACTTAT 4691758 Query 243384 GCCTGGCCTCGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGCCTTCACCAACAGTT 243443 |||||| | | || |||||||| ||| ||| ||||||||| | ||| | || Sbjct 4691757 GCCTGGTTTGACCTTCTCCAACGAGTTGATCTCTCGAGACGAGGGCATGCACACCGACTT 4691698 Query 243444 CGGTGAGCTTATGTATTCAA-AGCTCCAGAACAAGCTACCATTCGAAACGG-TCAAACAA 243501 | |||||| |||| | || | |||||| | | | || | || || Sbjct 4691697 TGCCT-GCTTATTACTTCAGCACCTTAACCACAAGCCAG-ACCCCAAGCTCATCGAAGCC 4691640 Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561 |||||||| || || |||| | ||| || |||||| | ||| ||| |||| || Sbjct 4691639 ATCATCACTGAGGCCGTTGCCATCGAGAAAGAATTCTTGACCGATGCTCTTCCCTGTGCT 4691580 Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 ||| ||||||||||| | | || ||| |||||| ||||| ||||| |||||||| | Sbjct 4691579 CTTCTTGGCATGAACGCCAAGCTGATGCAACAGTATATCGAGTTCGTCGCCGACCGTCTG 4691520 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | || | || | || || |||||| | | |||||||| ||| |||||| Sbjct 4691519 CTCCTGGCCATGGGAAACAAGCGCGTCTACAACGCAACTAACCCCTTCAGCTTCATGGAG 4691460 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGC 243741 ||| || ||| || || || ||||||||||| ||||| || |||| ||||| Sbjct 4691459 AACATCTCCCTTGCTGGCAAGACCAACTTCTTCGAGAAGCGAGTGGGTGACTATCAGAAG 4691400 Query 243742 CCTGGTGTGATG 243753 ||||||| ||| Sbjct 4691399 GCTGGTGTCATG 4691388 >seq2 Length=5498963 Score = 102 bits (112), Expect = 2e-16 Identities = 225/330 (68%), Gaps = 8/330 (2%) Strand=Plus/Minus Query 298085 ACGATAGGCGTGATGAACTTCTTCAAGAACCCTGGAATTTCTAGAAGATTAGGGAAACAG 298144 ||||| ||||| ||||||| ||||||| || || | || ||| ||||||| | Sbjct 2338753 ACGATTGGCGTAATGAACTCGACCAAGAACTTCGGGATCTTCAGGAGACTAGGGAACTGG 2338694 Query 298145 CTATGGAAAAAGTTCATGACGAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTC 298204 || |||||||| || | | || || ||| |||| || |||| || ||| Sbjct 2338693 ACTTGTAAAAAGTTGATCAACAACCCTTTGATATGACTTCCATCGTGATCCTGATCAGTC 2338634 Query 298205 ATGATCATCACATGACCGTAACGAA-GCGAGGACGTGTCTTTGTACACTTTACCGGTTTG 298263 |||||||||| |||||||||||||| || || ||||| |||| || || | ||| Sbjct 2338633 ATGATCATCAAATGACCGTAACGAAGGCCTTGA-GTGTCGGTGTAGACCTTCTTGTGTTG 2338575 Query 298264 AAGGCCGA-GAATTTGTTTGAGCGCTGTGATTTCTTCGTTCTTCGTGATGCTTG--CCAC 298320 || || | ||| || || | ||| || ||| | ||||| | ||| ||| | || Sbjct 2338574 GAGACCAAGGAAATTCTTGATGTTCTG-AATCTCTGCATTCTTGGAGAT--TTGATCGAC 2338518 Query 298321 GGATGCATCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCG 298380 || ||||| || ||||| | | ||||||||||| ||||| |||||| | || | Sbjct 2338517 AGAGGCATCACGAACATTGAGCAACTTTCCACGAAGCGGGAAAACTCCAAACAGATCCGG 2338458 Query 298381 ACCGACCACGGACAGCCCTGCGATTGCAAG 298410 ||| || ||||| | ||||| || ||||| Sbjct 2338457 ACCAACAACGGAACGACCTGCCATGGCAAG 2338428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102879872824150