Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq2 109 6e-19 seq1 84.2 2e-11 >seq2 Length=5498963 Score = 109 bits (120), Expect = 6e-19 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 ||||| || || ||||| ||| ||| || || |||| || || ||||| |||||||| Sbjct 3944423 TCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCTTCAAGTTGCTTTCCAGCGAAG 3944364 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 ||||| ||||| || || | || | || ||||| ||| ||| |||| | | | ||| Sbjct 3944363 ATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCC-TGAATTTTGGACTTAACGTT 3944305 Query 42138 GCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | || | | ||||| || ||||| |||| |||||||| || || || || ||||| || Sbjct 3944304 GTCAATGGTATCGCTAGACTCCACTTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGAC 3944245 Query 42197 AAAGATTTGCAT 42208 ||||||||||| Sbjct 3944244 GAAGATTTGCAT 3944233 Score = 105 bits (116), Expect = 7e-18 Identities = 167/237 (70%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032 ||||| |||| || | | | |||||||||||||| |||||||||||||| || ||| Sbjct 3944924 ATTTACTGACCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTG 3944865 Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092 || || | ||||| || | || || | || || || || || || | ||||||||| Sbjct 3944864 TAGTCGGAAAGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGA 3944805 Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCT 42151 || | ||| | | ||| ||||| ||| ||| |||| ||| | | | |||||| Sbjct 3944804 TCAGGTGGGATACCCTCTTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATGGTGTCGGA 3944746 Query 42152 CGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 |||||| || || | || || || ||||| || || || || || ||||| ||||| Sbjct 3944745 CGATTCGACTTCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| ||||| ||||| || | ||||||||| | || || | ||| ||||| ||||| Sbjct 3944652 CTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGACCATCTTCCAACTGTTTACCGGCGAA 3944593 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || | |||||| ||||| | || | | ||| || || ||| ||| |||| | Sbjct 3944592 GATCAATCGCTGTTGGTCTGGAGGAATACCCTCTTTATCTTGGATCTTTGACTTGACATT 3944533 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | |||||| || || || || | ||||| || ||||| || || ||||| || Sbjct 3944532 GTCGATGGTGTCGGATGACTCGACTTCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGAC 3944473 Query 42197 AAAGATTTGCAT 42208 ||||||||||| Sbjct 3944472 GAAGATTTGCAT 3944461 >seq1 Length=6137194 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 42019 CCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATA 42078 ||||||| || |||||||| || || || | || || |||||||| || || || | Sbjct 5194746 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGA 5194805 Query 42079 TGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCG 42138 | | |||||||||||| | || | | |||||||| ||| || |||| | Sbjct 5194806 TCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT 5194865 Query 42139 CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAA 42198 | | |||||| ||| ||||| || | |||||||| |||||||| || ||||| || | Sbjct 5194866 CGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 5194925 Query 42199 AGATTTGCATT 42209 || | || ||| Sbjct 5194926 AGCTGTGAATT 5194936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543212738888560