Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3 118 1e-21 seq2 100 3e-16 seq1 91.5 1e-13 >seq3 Length=5104443 Score = 118 bits (130), Expect = 1e-21 Identities = 345/521 (66%), Gaps = 19/521 (4%) Strand=Plus/Minus Query 52329 CCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCG-AGAGCGACACCGCCAC 52387 || ||| | ||||| ||||| | ||||| |||| ||||||| ||| || | | | Sbjct 4691912 CCCTGCATCCGCAAGAAGGCCGACTGGGCTTTGAAATGGATCGCAGAT-GATGCTTCGTC 4691854 Query 52388 GCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTT 52447 | | | |||| ||||||| ||||| || ||||| | || || || ||| || Sbjct 4691853 GTTTGGTCAGCGTCTGGTGGCATTCGCTGCTGTTGAGGGTATCTTCTTCTCTGGCTCATT 4691794 Query 52448 TGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGA 52507 ||||||||||| | | || | || || | ||||| || |||| ||| |||||| Sbjct 4691793 CGCCGCCATCTTCTGGTTGAAGGCCAAGGGACTTATGCCTGGTTTGACCTTCTCCAACGA 4691734 Query 52508 GTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CTACTACAAGACGC 52566 |||||| || || ||||| || ||||||| |||||||| ||| | |||| || || Sbjct 4691733 GTTGATCTCTCGAGACGAGGGCATGCACACCGACTTTGCCTGCTTATTACTTCA----GC 4691678 Query 52567 GCGTGACCGAAAAATTGGATTCGGACACGATCCT-GA--GCATGTTCAAGGAGGCGGTGG 52623 | | | | | || || | || | || | || ||| ||| ||||| || | Sbjct 4691677 ACCTTAACCACAAGCCAGACCC---CAAGCTCATCGAAGCCATCATCACTGAGGCCGTTG 4691621 Query 52624 CTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAACGCGC 52683 | ||||| || || || || || | || || || | || || ||||||||||| Sbjct 4691620 CCATCGAGAAAGAATTCTTGACCGATGCTCTTCCCTGTGCTCTTCTTGGCATGAACGCCA 4691561 Query 52684 AGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTCGGGCAGC 52743 || ||| |||| |||||||| || || || |||||| | || || || | Sbjct 4691560 AGCTGATGCAACAGTATATCGAGTTCGTCGCCGACCGTCTGCTCCTG--GCCATGGGAAA 4691503 Query 52744 CAA---AGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGG 52800 ||| || || |||||| || || || || ||| | ||||| || |||| | Sbjct 4691502 CAAGCGCGT-CTACAACGCAACTAACCCCTTCAGCTTCATGGAGAACATCTCCCTTGCTG 4691444 Query 52801 GCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTATAAG 52841 ||||||||||||| |||||||||||||| || || ||| || Sbjct 4691443 GCAAGACCAACTTCTTCGAGAAGCGAGTGGGTGACTATCAG 4691403 >seq2 Length=5498963 Score = 100 bits (110), Expect = 3e-16 Identities = 142/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 || ||||| || ||||||||||| |||| || || ||| || ||||| || || | Sbjct 3944426 GATTCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCTTCAAGTTGCTTTCCAGCG 3944367 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| ||||||||||| || ||||| || ||||| || || ||| |||| | |||| Sbjct 3944366 AAGATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATC-CTGAATTTTGGACTTAAC 3944308 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | ||| ||| | |||||||| |||| || | || || || || ||||| | Sbjct 3944307 GTTG-TCAATGGTATCGCTAGACTCCACTTCGAGGGTGATGGTCTTTCCGGTGAGAGTCT 3944249 Query 138599 TTACAAAAATCTGCAT 138614 | || || || ||||| Sbjct 3944248 TGACGAAGATTTGCAT 3944233 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || |||| | ||| || ||||| | | | ||||||||| |||||||||||| Sbjct 3944915 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 3944856 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || || || | |||||| || | | |||| | ||||| || || || || Sbjct 3944855 AGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGG 3944796 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 ||||| |||||||| ||| ||| || | | || | |||||||| ||| || || Sbjct 3944795 ATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGACT 3944736 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || |||||||| ||||| || || |||||||| Sbjct 3944735 TCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 93.3 bits (102), Expect = 4e-14 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| |||||||||||||| || ||| || || || | |||||||||| Sbjct 3944654 GACTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGACCATCTTCCAACTGTTTACCGGCG 3944595 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539 |||| | ||||||||||| ||||| ||||| ||||| || ||| ||| || | | Sbjct 3944594 AAGATCAATCGCTGTTGGTCTGGAGGAATACCCTCTTTATCTTGGATCTTTGACTTGACA 3944535 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 ||| || | |||||||| ||||| || || | || | || || || || || || || Sbjct 3944534 TTG-TCGATGGTGTCGGATGACTCGACTTCTAGAGTGATTGTCTTGCCTGTGAGGGTCTT 3944476 Query 138600 TACAAAAATCTGCAT 138614 || || || ||||| Sbjct 3944475 GACGAAGATTTGCAT 3944461 >seq1 Length=6137194 Score = 91.5 bits (100), Expect = 1e-13 Identities = 131/182 (72%), Gaps = 2/182 (1%) Strand=Plus/Plus Query 138425 CCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGA 138484 ||||||| |||||||| ||||| | || || || ||||| || || |||| | ||| Sbjct 5194746 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGA 5194805 Query 138485 TTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGT 138543 | | ||||| ||||||||||| || ||||| ||||| ||| || || | |||| Sbjct 5194806 TCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTG- 5194864 Query 138544 TCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACA 138603 || | |||||||| |||||||||||| | || | || || || || || || || || Sbjct 5194865 TCGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACG 5194924 Query 138604 AA 138605 || Sbjct 5194925 AA 5194926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496262344170480