Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23]
9 sequences; 29,273,723 total letters
Query= NC_011423.1
Length=111724
Score E
Sequences producing significant alignments: (Bits) Value
seq2 96.9 2e-15
>seq2
Length=5498963
Score = 96.9 bits (106), Expect = 2e-15
Identities = 158/228 (69%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
||||| |||| ||| || || ||||| ||||| || ||||| |||||||| |||
Sbjct 3944915 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 3944856
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| ||| | ||||| ||||||||||| || | ||||| ||||| || || |||
Sbjct 3944855 AGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGG 3944796
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || || ||||| || || || || | || || || ||| ||| ||
Sbjct 3944795 ATACCCTCTTTGTCTTGGATCTTTGACTTGACGTTGTCGATGGTGTCGGACGATTCGACT 3944736
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| ||||| || || || ||||| ||||| || || || ||||||
Sbjct 3944735 TCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCATA 3944688
Score = 87.8 bits (96), Expect = 1e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009
|||||||||| ||| | || | |||||| ||||| || || || |||||||| ||
Sbjct 3944687 CCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGAC 3944628
Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069
||| | | | ||||| || ||||| || ||| | ||||| ||||||||||| |||
Sbjct 3944627 AGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGA 3944568
Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129
|| || || || || || || || ||| | || || || ||| || ||
Sbjct 3944567 ATACCCTCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACT 3944508
Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177
|||| || || || || ||||| || || || || || |||||||||
Sbjct 3944507 TCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCATA 3944460
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 357391960798565
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |