Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2 138 1e-27 seq1 96.9 3e-15 >seq2 Length=5498963 Score = 138 bits (152), Expect = 1e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || || || |||||||| | |||||| || ||||||||||| || || ||| Sbjct 3944915 CCACCACGCAGTCTCAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAA 3944856 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| | ||| ||||||||||| ||||| | |||||||| ||||| || || || Sbjct 3944855 AGAGTTCGACCATCTTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGG 3944796 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292 || || ||||| ||||| || ||| |||| || | || | ||||||||| || ||||| Sbjct 3944795 ATACCCTCTTTGTCTTGGATCTTTGACTTGA-CGTTGTCGATGGTGTCGGACGATTCGAC 3944737 Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| ||||||| || ||||| || || ||||| || || || ||||| Sbjct 3944736 TTCTAGAGTAATAGTCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 129 bits (142), Expect = 5e-25 Identities = 169/232 (73%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || || || | ||| ||||| || || || ||||| || || || || || Sbjct 3944690 ATACCACCTCGCAGTCTGAGCACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTC- 3944632 Query 45171 CTGACGGTTTTAGA--ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCG 45228 |||| | | || ||| ||||| ||||| || ||| | |||||||| || ||||| | Sbjct 3944631 -TGACAGAGTCCGACCATCTTCCAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTG 3944573 Query 45229 GCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACT 45288 | ||||| || ||||||||||| || ||| |||| || | ||||||||| |||| Sbjct 3944572 GAGGAATACCCTCTTTATCTTGGATCTTTGACTTGACATTGTCGATGGTGTCGGATGACT 3944513 Query 45289 CGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||||| ||||| | || ||||| || || || || || || |||||||| Sbjct 3944512 CGACTTCTAGAGTGATTGTCTTGCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 107 bits (118), Expect = 2e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||| || || |||||||| ||||| || || || Sbjct 3944462 ATACCACCACGGAGGCGGAGGACGAGATGGAGAGTGGATTCCTTCTGGATGTTGTAGTCA 3944403 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| | || || | ||| ||||| ||| | || | || || || || || Sbjct 3944402 CTCAGGGTGCGACCGTCTTCAAGTTGCTTTCCAGCGAAGATGAGACGCTGTTGATCAGGA 3944343 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||||||||| ||||| |||| |||| | | | || | || | ||| ||| |||||| Sbjct 3944342 GGAATGCCTTCCTTATCCTGAA-TTTTGGACTTAACGTTGTCAATGGTATCGCTAGACTC 3944284 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 |||||||| || | || || ||||| ||||| || || || |||||||| Sbjct 3944283 CACTTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGACGAAGATTTGCAT 3944233 Score = 93.3 bits (102), Expect = 4e-14 Identities = 144/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || ||||| | | || ||||||| || |||||||||||||| || |||||| Sbjct 3944234 ATACCACCACGGAGACGAAGGACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCG 3944175 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | ||| ||| || | ||| ||||| ||| | || | |||||||| || || Sbjct 3944174 CTTAGGGTGCGGCCATCCTCGAGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGA 3944115 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| ||||| || || || |||| || | ||||||| ||||| Sbjct 3944114 GGAATGCCTTCCTTATCCTGGATCTTGGACTTGACATTGTCAATGGTGTCGCTGGACTCC 3944055 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGT 45316 || || || || | || || ||||| Sbjct 3944054 ACCTCAAGGGTGATGGTCTTTCCGGT 3944029 >seq1 Length=6137194 Score = 96.9 bits (106), Expect = 3e-15 Identities = 130/181 (72%), Gaps = 0/181 (0%) Strand=Plus/Plus Query 45151 CCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATA 45210 |||||||||| || |||||||||| ||| ||| || | || ||||| || | | Sbjct 5194746 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGA 5194805 Query 45211 TCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTT 45270 ||||||| ||||||||||| ||||| ||||| || ||||| || || |||| | Sbjct 5194806 TCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT 5194865 Query 45271 CTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAA 45330 | | ||||||||| ||||| || || || || | || ||||| || || || || || | Sbjct 5194866 CGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 5194925 Query 45331 A 45331 | Sbjct 5194926 A 5194926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452003149149640