Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq6 113 7e-20 seq3 86.0 1e-11 >seq6 Length=3112757 Score = 113 bits (124), Expect = 7e-20 Identities = 365/557 (66%), Gaps = 20/557 (4%) Strand=Plus/Plus Query 205185 TCCACAGGCCGTAAAACAGATCACGGGCCCTAATTCCGTCGTCTCCAAGGTTCTTTTTCA 205244 |||||||| |||| ||||| ||||| || | || | | || | ||| |||||||| ||| Sbjct 986141 TCCACAGGGCGTAGAACAGGTCACGAGCACGAACTTCTTCCTTGCCATGGTTCTTTCTCA 986200 Query 205245 AGTCCAGCCAAGCCGCAATGTCGGCGTGCCACGGCTCTAACCACACGGCCATTGCGCCTG 205304 || |||||| | | ||||||||||| ||||| || | | ||| | || || | Sbjct 986201 GGTTCAGCCACTCGAAGACATCGGCGTGCCATGGCTCCAAGTAAATGGCAAAGGCACCGG 986260 Query 205305 GCCTCTTGTTCCCACCCTGGTCCACCATGCGAGTCATCGCGTTGAAAACTCGCAGCATCG 205364 ||| |||||| || |||||||| || ||||| | |||||| |||| ||||| | Sbjct 986261 GCCGCTTGTTGCCTCCCTGGTCGACGTAGCGAGCAGTGTTGTTGAAGACTCTAAGCATGG 986320 Query 205365 GCACCAGACCGTTGGCGGTCCCGTTCGTGCTGTTGATGGCCGAGCCTTCAGCCCTCACGT 205424 | | || ||||| | || ||||| || | | ||| ||||| || | | Sbjct 986321 GGATGAGGCCGTTTGATGTGCCGTTGGTTCCGGCGATATAGGAGCCAGTGGCACGAA--- 986377 Query 205425 TGGA--GATGGCCGCG-CCAATCCCGCCAGAACACTTGGCGATCTGGGCGCA-CTCTTGC 205480 || | || | | | ||||| ||||| | ||||| |||| || || ||||| Sbjct 986378 TGCAATGAGCGTTGAGACCAATACCGCCGGCGGTCTTGGAGATCATTGCACAGGTCTTG- 986436 Query 205481 AGAGTGCTGTAGATGCCTGCGATGGAATCGTCCGCCAGTGTCA--CCAGATAGCACGAAG 205538 ||||| ||||||||| | ||| ||| | || ||||| | ||| |||| || | Sbjct 986437 AGAGTATCATAGATGCCTTCAATGCTGTCGGACTTCA-TGTCAATCAAGA-AGCAGGATG 986494 Query 205539 CCAGCTTGGCAAAGTTG----GTGCCCGCGTGGAAGAGCGTGGGGCTGGCGTGGCTGAAG 205594 || || || |||| ||||| |||| ||| || || || ||| || ||||| Sbjct 986495 ACAACTGGG----GTTGAGGAGTGCCAGCGTTGAAAAGGGTTGGCGAGGCATGAGTGAAG 986550 Query 205595 CGCTTCTCGCTCAAACACCTGTAGGTCTCCAGCACGCTCTCCAGATCGAAGCCGTGAATA 205654 | ||||| | || |||| ||||| | | |||| | || ||||||||| Sbjct 986551 CACTTCTGGGACATGAGGTTGTATGTCTCAATGGCCTTCTCGACGTCATTGCCGTGAATG 986610 Query 205655 CCTATGGCGATCCTCATGAAGAGGTGTTGAGGTCTCTCCATCACCCTCTCGTTCACCTTG 205714 || | ||| | | ||||| || ||||| |||||||| || | | | | |||| Sbjct 986611 CCCACGGCCACACGCATGAGAAGATGTTGTGGTCTCTCTGCAACTTTGTTGCCAATCTTG 986670 Query 205715 AGCAGATAGGCTCTCTC 205731 ||||| |||| |||||| Sbjct 986671 AGCAGGTAGGATCTCTC 986687 >seq3 Length=5104443 Score = 86.0 bits (94), Expect = 1e-11 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 159922 GCACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAG 159981 ||| ||||||||| ||||| |||||||| |||||||| ||||||||||| | | | | Sbjct 4691691 GCAGGCAAAGTCGGTGTGCATGCCCTCGTCTCGAGAGATCAACTCGTTGGAGAAGGTCAA 4691750 Query 159982 GCCCGGCATGA-TCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAA 160040 || ||||| | |||| | | || | ||| || ||||| || || | || || | Sbjct 4691751 ACCAGGCATAAGTCCCTTG-GCCTTCAACCAGAAGATGGCGGCGAATGAGCCAGAGAAGA 4691809 Query 160041 AGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGA 160086 |||| ||||| || || || || ||||| || | || |||||| || Sbjct 4691810 AGATACCCTCAACAGCAGCGAATGCCACCAGACGCTGACCAAACGA 4691855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795155110545040