Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Exophiala_20mesophila_20[genbank_20GCA_5F000836275.1_202015-02-23] 9 sequences; 29,273,723 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2 131 2e-25 seq1 111 2e-19 >seq2 Length=5498963 Score = 131 bits (144), Expect = 2e-25 Identities = 159/214 (74%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 |||||||| ||||| || |||||||||||||| ||||||||||| ||||| || | || Sbjct 3944901 CAACACCAAATGCAGGGTGCTCTCCTTTTGGATGTTGTAGTCGGAAAGAGTTCGACCATC 3944842 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || | || ||||| || || ||||| |||||||| || | || | | ||| ||||| Sbjct 3944841 TTCCAATTGTTTGCCTGCAAAGATCAATCGCTGCTGATCAGGTGGGATACCCTCTTTGTC 3944782 Query 46501 CATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGG 46559 |||||| ||||| ||| | | | |||||| |||||| || || | || || | Sbjct 3944781 TTGGATCTTTGACTTGA-CGTTGTCGATGGTGTCGGACGATTCGACTTCTAGAGTAATAG 3944723 Query 46560 TTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | ||||| ||||| ||||| || ||||| ||||| Sbjct 3944722 TCTTGCCAGTCAGGGTTTTGACGAAGATCTGCAT 3944689 Score = 104 bits (114), Expect = 3e-17 Identities = 135/187 (72%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 || |||||||| ||| ||||||||||| ||||| ||| ||| ||||| | || ||| Sbjct 3944213 ACAAGATGCAAGGTAGATTCCTTTTGGATGTTGTAATCGCTTAGGGTGCGGCCATCCTCG 3944154 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 || ||||| || ||||| || | ||| ||||| || | || | || ||||| ||| | Sbjct 3944153 AGTTGCTTTCCAGCGAAGATAAGGCGTTGCTGATCAGGAGGAATGCCTTCCTTATCCTGG 3944094 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||||| | | | |||||||| || ||||| || | |||||||| || Sbjct 3944093 ATCTTGGACTTGACATTGTCAATGGTGTCGCTGGACTCCACCTCAAGGGTGATGGTCTTT 3944034 Query 46565 CCCGTCA 46571 || |||| Sbjct 3944033 CCGGTCA 3944027 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| ||||| | ||| |||||| || || |||||||| || ||||| || | || || Sbjct 3944670 CACGAGATGAAGAGTAGACTCCTTCTGAATGTTGTAGTCTGACAGAGTCCGACCATCTTC 3944611 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 | ||| || |||||||| ||||| ||||| ||||| | || | | ||| || || Sbjct 3944610 CAACTGTTTACCGGCGAAGATCAATCGCTGTTGGTCTGGAGGAATACCCTCTTTATCTTG 3944551 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 |||||| ||||| | | | |||||| || || || || | ||||| || || Sbjct 3944550 GATCTTTGACTTGACATTGTCGATGGTGTCGGATGACTCGACTTCTAGAGTGATTGTCTT 3944491 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| || || || || || ||||||||||| Sbjct 3944490 GCCTGTGAGGGTCTTGACGAAGATTTGCAT 3944461 Score = 82.4 bits (90), Expect = 9e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 ||||| ||||| |||||||| || ||||| |||| || || ||||| || ||||| Sbjct 3944423 TCCTTCTGGATGTTGTAGTCACTCAGGGTGCGACCGTCTTCAAGTTGCTTTCCAGCGAAG 3944364 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | ||||| || || | || | || ||||| ||| || || ||| | ||| Sbjct 3944363 ATGAGACGCTGTTGATCAGGAGGAATGCCTTCCTTATCCTGAATTTTGGACTTAA-CGTT 3944305 Query 46523 GCCACCG-TGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | || | | ||||| || ||||| || | |||||||| || || || || || || || Sbjct 3944304 GTCAATGGTATCGCTAGACTCCACTTCGAGGGTGATGGTCTTTCCGGTGAGAGTCTTGAC 3944245 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 3944244 GAAGATTTGCAT 3944233 >seq1 Length=6137194 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 46404 CCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 46463 |||||||||| ||||| ||| || ||||| | || ||||||||||| ||||| || | Sbjct 5194746 CCTTTTGGATGTTGTAATCGCTGAGGGTGCGGCCATCTTCGAGCTGCTTTCCGGCAAAGA 5194805 Query 46464 TCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCG 46523 |||| ||||||||||| | || | | |||||||| |||||| ||||| | Sbjct 5194806 TCAATCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCTTGGATCTTGGACTTGACATTGT 5194865 Query 46524 CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAA 46583 | | |||||| ||| ||||| || | |||||||| |||||||| || || || || | Sbjct 5194866 CGATGGTGTCGGACGACTCCACCTCAAGGGTGATGGTCTTGCCCGTGAGGGTCTTGACGA 5194925 Query 46584 AGATTTGCATT 46594 || | || ||| Sbjct 5194926 AGCTGTGAATT 5194936 Score = 89.7 bits (98), Expect = 6e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || || || || |||| ||||| |||||||||||||| Sbjct 441117 CTCCTTCTGGATGTTGTAGTCAGACAGGGTTCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 441058 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 |||| || |||||||| | || | || ||||||||| Sbjct 441057 GATCAGACGTTGCTGGTCAGGTGGGATGCCCTCCTTGTC 441019 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238336410680